Gene : Glyma.06G082200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22792:SF64 - LA PROTEIN 1-RELATED Genomic Order:  822
Name:  ? Glyma.06G082200 Secondary Identifier:  ? PAC:30549216
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G082200 0.5kb upstream 0.5kb upstream 4093 true Chr06: 6322924-6327016 Glycine max
Glyma.06G082200 0.5kb upstream 0.5kb upstream 500 false Chr06: 6322924-6323423 Glycine max
Glyma.06G082200 0.5kb downstream 0.5kb downstream 4093 true Chr06: 6323424-6327516 Glycine max
Glyma.06G082200 0.5kb downstream 0.5kb downstream 500 false Chr06: 6327017-6327516 Glycine max
Glyma.06G082200 1.0kb upstream 1.0kb upstream 4593 true Chr06: 6322424-6327016 Glycine max
Glyma.06G082200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 6322424-6323423 Glycine max
Glyma.06G082200 1.0kb downstream 1.0kb downstream 4593 true Chr06: 6323424-6328016 Glycine max
Glyma.06G082200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 6327017-6328016 Glycine max
Glyma.06G082200 2.0kb upstream 2.0kb upstream 5593 true Chr06: 6321424-6327016 Glycine max
Glyma.06G082200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 6321424-6323423 Glycine max
Glyma.06G082200 2.0kb downstream 2.0kb downstream 5593 true Chr06: 6323424-6329016 Glycine max
Glyma.06G082200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 6327017-6329016 Glycine max
Glyma.06G082200 5.0kb upstream 5.0kb upstream 8593 true Chr06: 6318424-6327016 Glycine max
Glyma.06G082200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 6318424-6323423 Glycine max
Glyma.06G082200 5.0kb downstream 5.0kb downstream 8593 true Chr06: 6323424-6332016 Glycine max
Glyma.06G082200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 6327017-6332016 Glycine max
Glyma.06G082200 10.0kb upstream 10.0kb upstream 13593 true Chr06: 6313424-6327016 Glycine max
Glyma.06G082200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 6313424-6323423 Glycine max
Glyma.06G082200 10.0kb downstream 10.0kb downstream 13593 true Chr06: 6323424-6337016 Glycine max
Glyma.06G082200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 6327017-6337016 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041135 5273 Angiosperm View MSA
122309017 5265 Fabidae View MSA
124064026 5270 Rosid View MSA
123746572 5271 Pentapetalae View MSA
122791313 5272 Eudicot View MSA
121349930 5274 Embryophyte View MSA
123427383 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.80882 0.0 33.834    
cufflinks 12.6689 0.0 43.0151    
cufflinks 6.28157 0.0 22.9786   Low
cufflinks 10.1488 0.0 34.9747    
cufflinks 16.4859 0.0 55.7444   High
cufflinks 10.4778 0.0 36.326    
cufflinks 13.3748 0.0 45.2588    
cufflinks 11.8856 0.0 40.3785    
cufflinks 11.3246 0.0 38.6941    
cufflinks 2.526        
cufflinks 1.565        
cufflinks 3.45        
cufflinks 7.183       High
cufflinks 9.156     High High
cufflinks 2.83        
cufflinks 2.126        
cufflinks 2.556        
cufflinks 2.901        
cufflinks 4.753       High
cufflinks 1.203       Low
cufflinks 2.286        
cufflinks 1.72        
cufflinks 2.432        
cufflinks 1.454       Low
cufflinks 1.967        
cufflinks 2.463        

0 Strain