Gene : Medtr1g026890 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22792:SF64 - LA PROTEIN 1-RELATED Description:  RNA recognition motif protein
Genomic Order:  1180 Name:  ? Medtr1g026890
Secondary Identifier:  ? PAC:31097586
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g026890 0.5kb upstream 0.5kb upstream 6209 true chr1: 8830191-8836399 Medicago truncatula
Medtr1g026890 0.5kb upstream 0.5kb upstream 500 false chr1: 8835900-8836399 Medicago truncatula
Medtr1g026890 0.5kb downstream 0.5kb downstream 6209 true chr1: 8829691-8835899 Medicago truncatula
Medtr1g026890 0.5kb downstream 0.5kb downstream 500 false chr1: 8829691-8830190 Medicago truncatula
Medtr1g026890 1.0kb upstream 1.0kb upstream 6709 true chr1: 8830191-8836899 Medicago truncatula
Medtr1g026890 1.0kb upstream 1.0kb upstream 1000 false chr1: 8835900-8836899 Medicago truncatula
Medtr1g026890 1.0kb downstream 1.0kb downstream 6709 true chr1: 8829191-8835899 Medicago truncatula
Medtr1g026890 1.0kb downstream 1.0kb downstream 1000 false chr1: 8829191-8830190 Medicago truncatula
Medtr1g026890 2.0kb upstream 2.0kb upstream 7709 true chr1: 8830191-8837899 Medicago truncatula
Medtr1g026890 2.0kb upstream 2.0kb upstream 2000 false chr1: 8835900-8837899 Medicago truncatula
Medtr1g026890 2.0kb downstream 2.0kb downstream 7709 true chr1: 8828191-8835899 Medicago truncatula
Medtr1g026890 2.0kb downstream 2.0kb downstream 2000 false chr1: 8828191-8830190 Medicago truncatula
Medtr1g026890 5.0kb upstream 5.0kb upstream 10709 true chr1: 8830191-8840899 Medicago truncatula
Medtr1g026890 5.0kb upstream 5.0kb upstream 5000 false chr1: 8835900-8840899 Medicago truncatula
Medtr1g026890 5.0kb downstream 5.0kb downstream 10709 true chr1: 8825191-8835899 Medicago truncatula
Medtr1g026890 5.0kb downstream 5.0kb downstream 5000 false chr1: 8825191-8830190 Medicago truncatula
Medtr1g026890 10.0kb upstream 10.0kb upstream 15709 true chr1: 8830191-8845899 Medicago truncatula
Medtr1g026890 10.0kb upstream 10.0kb upstream 10000 false chr1: 8835900-8845899 Medicago truncatula
Medtr1g026890 10.0kb downstream 10.0kb downstream 15709 true chr1: 8820191-8835899 Medicago truncatula
Medtr1g026890 10.0kb downstream 10.0kb downstream 10000 false chr1: 8820191-8830190 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041135 5273 Angiosperm View MSA
122309017 5265 Fabidae View MSA
124064026 5270 Rosid View MSA
123746572 5271 Pentapetalae View MSA
122791313 5272 Eudicot View MSA
121349930 5274 Embryophyte View MSA
123427383 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.206        
cufflinks 5.441        
cufflinks 5.986        
cufflinks 2.882       Low
cufflinks 9.181       High
cufflinks 2.249       Low
cufflinks 4.224        
cufflinks 5.386        
cufflinks 4.103        

0 Strain