Gene : La1 A. thaliana TAIR10
Primary Identifier:  ? AT4G32720 Defline:  (1 of 2) K11090 - lupus La protein (LA, SSB)
Genomic Order:  3338 Name:  ? AT4G32720
Secondary Identifier:  ? PAC:19645116
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G32720 0.5kb upstream 0.5kb upstream 3269 true Chr4: 15786709-15789977 Arabidopsis thaliana
AT4G32720 0.5kb upstream 0.5kb upstream 500 false Chr4: 15786709-15787208 Arabidopsis thaliana
AT4G32720 0.5kb downstream 0.5kb downstream 3269 true Chr4: 15787209-15790477 Arabidopsis thaliana
AT4G32720 0.5kb downstream 0.5kb downstream 500 false Chr4: 15789978-15790477 Arabidopsis thaliana
AT4G32720 1.0kb upstream 1.0kb upstream 3769 true Chr4: 15786209-15789977 Arabidopsis thaliana
AT4G32720 1.0kb upstream 1.0kb upstream 1000 false Chr4: 15786209-15787208 Arabidopsis thaliana
AT4G32720 1.0kb downstream 1.0kb downstream 3769 true Chr4: 15787209-15790977 Arabidopsis thaliana
AT4G32720 1.0kb downstream 1.0kb downstream 1000 false Chr4: 15789978-15790977 Arabidopsis thaliana
AT4G32720 2.0kb upstream 2.0kb upstream 4769 true Chr4: 15785209-15789977 Arabidopsis thaliana
AT4G32720 2.0kb upstream 2.0kb upstream 2000 false Chr4: 15785209-15787208 Arabidopsis thaliana
AT4G32720 2.0kb downstream 2.0kb downstream 4769 true Chr4: 15787209-15791977 Arabidopsis thaliana
AT4G32720 2.0kb downstream 2.0kb downstream 2000 false Chr4: 15789978-15791977 Arabidopsis thaliana
AT4G32720 5.0kb upstream 5.0kb upstream 7769 true Chr4: 15782209-15789977 Arabidopsis thaliana
AT4G32720 5.0kb upstream 5.0kb upstream 5000 false Chr4: 15782209-15787208 Arabidopsis thaliana
AT4G32720 5.0kb downstream 5.0kb downstream 7769 true Chr4: 15787209-15794977 Arabidopsis thaliana
AT4G32720 5.0kb downstream 5.0kb downstream 5000 false Chr4: 15789978-15794977 Arabidopsis thaliana
AT4G32720 10.0kb upstream 10.0kb upstream 12769 true Chr4: 15777209-15789977 Arabidopsis thaliana
AT4G32720 10.0kb upstream 10.0kb upstream 10000 false Chr4: 15777209-15787208 Arabidopsis thaliana
AT4G32720 10.0kb downstream 10.0kb downstream 12769 true Chr4: 15787209-15799977 Arabidopsis thaliana
AT4G32720 10.0kb downstream 10.0kb downstream 10000 false Chr4: 15789978-15799977 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041135 5273 Angiosperm View MSA
122379543 5261 Brassicaceae View MSA
123833112 5264 Brassicales-Malvales View MSA
124342416 5266 SBM View MSA
124245209 5268 Malvidae View MSA
124064026 5270 Rosid View MSA
123746572 5271 Pentapetalae View MSA
122791313 5272 Eudicot View MSA
121349930 5274 Embryophyte View MSA
123427383 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.249        
cufflinks 16.048        
cufflinks 10.011        
cufflinks 17.78        
cufflinks 8.4       Low
cufflinks 18.024       High

0 Strain