Gene : Cagra.4395s0179 C. grandiflora v1.1
Defline:  (1 of 1) PTHR32018:SF8 - RHAMNOGALACTURONATE LYASE-LIKE PROTEIN Genomic Order:  179
Name:  ? Cagra.4395s0179 Secondary Identifier:  ? PAC:28898314
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4395s0179 0.5kb upstream 0.5kb upstream 5061 true Scaffold4395: 672442-677502 Capsella grandiflora
Cagra.4395s0179 0.5kb upstream 0.5kb upstream 500 false Scaffold4395: 677003-677502 Capsella grandiflora
Cagra.4395s0179 0.5kb downstream 0.5kb downstream 5061 true Scaffold4395: 671942-677002 Capsella grandiflora
Cagra.4395s0179 0.5kb downstream 0.5kb downstream 500 false Scaffold4395: 671942-672441 Capsella grandiflora
Cagra.4395s0179 1.0kb upstream 1.0kb upstream 5561 true Scaffold4395: 672442-678002 Capsella grandiflora
Cagra.4395s0179 1.0kb upstream 1.0kb upstream 1000 false Scaffold4395: 677003-678002 Capsella grandiflora
Cagra.4395s0179 1.0kb downstream 1.0kb downstream 5561 true Scaffold4395: 671442-677002 Capsella grandiflora
Cagra.4395s0179 1.0kb downstream 1.0kb downstream 1000 false Scaffold4395: 671442-672441 Capsella grandiflora
Cagra.4395s0179 2.0kb upstream 2.0kb upstream 6561 true Scaffold4395: 672442-679002 Capsella grandiflora
Cagra.4395s0179 2.0kb upstream 2.0kb upstream 2000 false Scaffold4395: 677003-679002 Capsella grandiflora
Cagra.4395s0179 2.0kb downstream 2.0kb downstream 6561 true Scaffold4395: 670442-677002 Capsella grandiflora
Cagra.4395s0179 2.0kb downstream 2.0kb downstream 2000 false Scaffold4395: 670442-672441 Capsella grandiflora
Cagra.4395s0179 5.0kb upstream 5.0kb upstream 9561 true Scaffold4395: 672442-682002 Capsella grandiflora
Cagra.4395s0179 5.0kb upstream 5.0kb upstream 5000 false Scaffold4395: 677003-682002 Capsella grandiflora
Cagra.4395s0179 5.0kb downstream 5.0kb downstream 9561 true Scaffold4395: 667442-677002 Capsella grandiflora
Cagra.4395s0179 5.0kb downstream 5.0kb downstream 5000 false Scaffold4395: 667442-672441 Capsella grandiflora
Cagra.4395s0179 10.0kb upstream 10.0kb upstream 14561 true Scaffold4395: 672442-687002 Capsella grandiflora
Cagra.4395s0179 10.0kb upstream 10.0kb upstream 10000 false Scaffold4395: 677003-687002 Capsella grandiflora
Cagra.4395s0179 10.0kb downstream 10.0kb downstream 14561 true Scaffold4395: 662442-677002 Capsella grandiflora
Cagra.4395s0179 10.0kb downstream 10.0kb downstream 10000 false Scaffold4395: 662442-672441 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041153 5273 Angiosperm View MSA
122368597 5261 Brassicaceae View MSA
123835035 5264 Brassicales-Malvales View MSA
124343927 5266 SBM View MSA
124239399 5268 Malvidae View MSA
124050367 5270 Rosid View MSA
123741436 5271 Pentapetalae View MSA
122791943 5272 Eudicot View MSA
121347296 5274 Embryophyte View MSA
123380523 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain