Gene : Cagra.5118s0003 C. grandiflora v1.1
Defline:  (1 of 3) PF04278 - Tic22-like family (Tic22) Genomic Order:  3
Name:  ? Cagra.5118s0003 Secondary Identifier:  ? PAC:28905905
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.5118s0003 0.5kb upstream 0.5kb upstream 4035 true Scaffold5118: 9449-13483 Capsella grandiflora
Cagra.5118s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold5118: 12984-13483 Capsella grandiflora
Cagra.5118s0003 0.5kb downstream 0.5kb downstream 4035 true Scaffold5118: 8949-12983 Capsella grandiflora
Cagra.5118s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold5118: 8949-9448 Capsella grandiflora
Cagra.5118s0003 1.0kb upstream 1.0kb upstream 4535 true Scaffold5118: 9449-13983 Capsella grandiflora
Cagra.5118s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold5118: 12984-13983 Capsella grandiflora
Cagra.5118s0003 1.0kb downstream 1.0kb downstream 4535 true Scaffold5118: 8449-12983 Capsella grandiflora
Cagra.5118s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold5118: 8449-9448 Capsella grandiflora
Cagra.5118s0003 2.0kb upstream 2.0kb upstream 5535 true Scaffold5118: 9449-14983 Capsella grandiflora
Cagra.5118s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold5118: 12984-14983 Capsella grandiflora
Cagra.5118s0003 2.0kb downstream 2.0kb downstream 5535 true Scaffold5118: 7449-12983 Capsella grandiflora
Cagra.5118s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold5118: 7449-9448 Capsella grandiflora
Cagra.5118s0003 5.0kb upstream 5.0kb upstream 8535 true Scaffold5118: 9449-17983 Capsella grandiflora
Cagra.5118s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold5118: 12984-17983 Capsella grandiflora
Cagra.5118s0003 5.0kb downstream 5.0kb downstream 8535 true Scaffold5118: 4449-12983 Capsella grandiflora
Cagra.5118s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold5118: 4449-9448 Capsella grandiflora
Cagra.5118s0003 10.0kb upstream 10.0kb upstream 13535 true Scaffold5118: 9449-22983 Capsella grandiflora
Cagra.5118s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold5118: 12984-22983 Capsella grandiflora
Cagra.5118s0003 10.0kb downstream 10.0kb downstream 12983 true Scaffold5118: 1-12983 Capsella grandiflora
Cagra.5118s0003 10.0kb downstream 10.0kb downstream 9448 false Scaffold5118: 1-9448 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366845 5261 Brassicaceae View MSA
123827689 5264 Brassicales-Malvales View MSA
124340823 5266 SBM View MSA
124240696 5268 Malvidae View MSA
124063444 5270 Rosid View MSA
123744483 5271 Pentapetalae View MSA
122790475 5272 Eudicot View MSA
122047380 5273 Angiosperm View MSA
121344233 5274 Embryophyte View MSA
123380010 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain