Gene : Cagra.9457s0004 C. grandiflora v1.1
Defline:  (1 of 2) KOG0131//KOG4210 - Splicing factor 3b, subunit 4 // Nuclear localization sequence binding protein Genomic Order:  4
Name:  ? Cagra.9457s0004 Secondary Identifier:  ? PAC:28893976
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9457s0004 0.5kb upstream 0.5kb upstream 3132 true Scaffold9457: 13874-17005 Capsella grandiflora
Cagra.9457s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold9457: 16506-17005 Capsella grandiflora
Cagra.9457s0004 0.5kb downstream 0.5kb downstream 3132 true Scaffold9457: 13374-16505 Capsella grandiflora
Cagra.9457s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold9457: 13374-13873 Capsella grandiflora
Cagra.9457s0004 1.0kb upstream 1.0kb upstream 3632 true Scaffold9457: 13874-17505 Capsella grandiflora
Cagra.9457s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold9457: 16506-17505 Capsella grandiflora
Cagra.9457s0004 1.0kb downstream 1.0kb downstream 3632 true Scaffold9457: 12874-16505 Capsella grandiflora
Cagra.9457s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold9457: 12874-13873 Capsella grandiflora
Cagra.9457s0004 2.0kb upstream 2.0kb upstream 4632 true Scaffold9457: 13874-18505 Capsella grandiflora
Cagra.9457s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold9457: 16506-18505 Capsella grandiflora
Cagra.9457s0004 2.0kb downstream 2.0kb downstream 4632 true Scaffold9457: 11874-16505 Capsella grandiflora
Cagra.9457s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold9457: 11874-13873 Capsella grandiflora
Cagra.9457s0004 5.0kb upstream 5.0kb upstream 7632 true Scaffold9457: 13874-21505 Capsella grandiflora
Cagra.9457s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold9457: 16506-21505 Capsella grandiflora
Cagra.9457s0004 5.0kb downstream 5.0kb downstream 7632 true Scaffold9457: 8874-16505 Capsella grandiflora
Cagra.9457s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold9457: 8874-13873 Capsella grandiflora
Cagra.9457s0004 10.0kb upstream 10.0kb upstream 12632 true Scaffold9457: 13874-26505 Capsella grandiflora
Cagra.9457s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold9457: 16506-26505 Capsella grandiflora
Cagra.9457s0004 10.0kb downstream 10.0kb downstream 12632 true Scaffold9457: 3874-16505 Capsella grandiflora
Cagra.9457s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold9457: 3874-13873 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372555 5261 Brassicaceae View MSA
123837031 5264 Brassicales-Malvales View MSA
124339957 5266 SBM View MSA
124251598 5268 Malvidae View MSA
124064964 5270 Rosid View MSA
123740266 5271 Pentapetalae View MSA
122794524 5272 Eudicot View MSA
122049515 5273 Angiosperm View MSA
121344395 5274 Embryophyte View MSA
123428747 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain