Gene : Cagra.1157s0018 C. grandiflora v1.1
Defline:  (1 of 54) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  18
Name:  ? Cagra.1157s0018 Secondary Identifier:  ? PAC:28919313
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1157s0018 0.5kb upstream 0.5kb upstream 2732 true Scaffold1157: 86611-89342 Capsella grandiflora
Cagra.1157s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold1157: 86611-87110 Capsella grandiflora
Cagra.1157s0018 0.5kb downstream 0.5kb downstream 2732 true Scaffold1157: 87111-89842 Capsella grandiflora
Cagra.1157s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold1157: 89343-89842 Capsella grandiflora
Cagra.1157s0018 1.0kb upstream 1.0kb upstream 3232 true Scaffold1157: 86111-89342 Capsella grandiflora
Cagra.1157s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold1157: 86111-87110 Capsella grandiflora
Cagra.1157s0018 1.0kb downstream 1.0kb downstream 3232 true Scaffold1157: 87111-90342 Capsella grandiflora
Cagra.1157s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold1157: 89343-90342 Capsella grandiflora
Cagra.1157s0018 2.0kb upstream 2.0kb upstream 4232 true Scaffold1157: 85111-89342 Capsella grandiflora
Cagra.1157s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold1157: 85111-87110 Capsella grandiflora
Cagra.1157s0018 2.0kb downstream 2.0kb downstream 4232 true Scaffold1157: 87111-91342 Capsella grandiflora
Cagra.1157s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold1157: 89343-91342 Capsella grandiflora
Cagra.1157s0018 5.0kb upstream 5.0kb upstream 7232 true Scaffold1157: 82111-89342 Capsella grandiflora
Cagra.1157s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold1157: 82111-87110 Capsella grandiflora
Cagra.1157s0018 5.0kb downstream 5.0kb downstream 7232 true Scaffold1157: 87111-94342 Capsella grandiflora
Cagra.1157s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold1157: 89343-94342 Capsella grandiflora
Cagra.1157s0018 10.0kb upstream 10.0kb upstream 12232 true Scaffold1157: 77111-89342 Capsella grandiflora
Cagra.1157s0018 10.0kb upstream 10.0kb upstream 10000 false Scaffold1157: 77111-87110 Capsella grandiflora
Cagra.1157s0018 10.0kb downstream 10.0kb downstream 12232 true Scaffold1157: 87111-99342 Capsella grandiflora
Cagra.1157s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold1157: 89343-99342 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366610 5261 Brassicaceae View MSA
123829217 5264 Brassicales-Malvales View MSA
124340552 5266 SBM View MSA
124252704 5268 Malvidae View MSA
124072363 5270 Rosid View MSA
123740411 5271 Pentapetalae View MSA
122793387 5272 Eudicot View MSA
122048876 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain