Gene : Cagra.22079s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR33095:SF7 - AR781 Genomic Order:  2
Name:  ? Cagra.22079s0002 Secondary Identifier:  ? PAC:28909187
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.22079s0002 0.5kb upstream 0.5kb upstream 1734 true Scaffold22079: 3879-5612 Capsella grandiflora
Cagra.22079s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold22079: 3879-4378 Capsella grandiflora
Cagra.22079s0002 0.5kb downstream 0.5kb downstream 1734 true Scaffold22079: 4379-6112 Capsella grandiflora
Cagra.22079s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold22079: 5613-6112 Capsella grandiflora
Cagra.22079s0002 1.0kb upstream 1.0kb upstream 2234 true Scaffold22079: 3379-5612 Capsella grandiflora
Cagra.22079s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold22079: 3379-4378 Capsella grandiflora
Cagra.22079s0002 1.0kb downstream 1.0kb downstream 2110 true Scaffold22079: 4379-6488 Capsella grandiflora
Cagra.22079s0002 1.0kb downstream 1.0kb downstream 876 false Scaffold22079: 5613-6488 Capsella grandiflora
Cagra.22079s0002 2.0kb upstream 2.0kb upstream 3234 true Scaffold22079: 2379-5612 Capsella grandiflora
Cagra.22079s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold22079: 2379-4378 Capsella grandiflora
Cagra.22079s0002 2.0kb downstream 2.0kb downstream 2110 true Scaffold22079: 4379-6488 Capsella grandiflora
Cagra.22079s0002 2.0kb downstream 2.0kb downstream 876 false Scaffold22079: 5613-6488 Capsella grandiflora
Cagra.22079s0002 5.0kb upstream 5.0kb upstream 5612 true Scaffold22079: 1-5612 Capsella grandiflora
Cagra.22079s0002 5.0kb upstream 5.0kb upstream 4378 false Scaffold22079: 1-4378 Capsella grandiflora
Cagra.22079s0002 5.0kb downstream 5.0kb downstream 2110 true Scaffold22079: 4379-6488 Capsella grandiflora
Cagra.22079s0002 5.0kb downstream 5.0kb downstream 876 false Scaffold22079: 5613-6488 Capsella grandiflora
Cagra.22079s0002 10.0kb upstream 10.0kb upstream 5612 true Scaffold22079: 1-5612 Capsella grandiflora
Cagra.22079s0002 10.0kb upstream 10.0kb upstream 4378 false Scaffold22079: 1-4378 Capsella grandiflora
Cagra.22079s0002 10.0kb downstream 10.0kb downstream 2110 true Scaffold22079: 4379-6488 Capsella grandiflora
Cagra.22079s0002 10.0kb downstream 10.0kb downstream 876 false Scaffold22079: 5613-6488 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365100 5261 Brassicaceae View MSA
123828304 5264 Brassicales-Malvales View MSA
124338699 5266 SBM View MSA
124237942 5268 Malvidae View MSA
124067177 5270 Rosid View MSA
123751144 5271 Pentapetalae View MSA
122791968 5272 Eudicot View MSA
122047451 5273 Angiosperm View MSA
121350053 5274 Embryophyte View MSA
123381556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain