Gene : Cagra.0053s0002 C. grandiflora v1.1
Defline:  (1 of 22) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED Genomic Order:  2
Name:  ? Cagra.0053s0002 Secondary Identifier:  ? PAC:28907015
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0053s0002 0.5kb upstream 0.5kb upstream 983 true Scaffold53: 1736-2718 Capsella grandiflora
Cagra.0053s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold53: 1736-2235 Capsella grandiflora
Cagra.0053s0002 0.5kb downstream 0.5kb downstream 983 true Scaffold53: 2236-3218 Capsella grandiflora
Cagra.0053s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold53: 2719-3218 Capsella grandiflora
Cagra.0053s0002 1.0kb upstream 1.0kb upstream 1483 true Scaffold53: 1236-2718 Capsella grandiflora
Cagra.0053s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold53: 1236-2235 Capsella grandiflora
Cagra.0053s0002 1.0kb downstream 1.0kb downstream 1483 true Scaffold53: 2236-3718 Capsella grandiflora
Cagra.0053s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold53: 2719-3718 Capsella grandiflora
Cagra.0053s0002 2.0kb upstream 2.0kb upstream 2483 true Scaffold53: 236-2718 Capsella grandiflora
Cagra.0053s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold53: 236-2235 Capsella grandiflora
Cagra.0053s0002 2.0kb downstream 2.0kb downstream 2483 true Scaffold53: 2236-4718 Capsella grandiflora
Cagra.0053s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold53: 2719-4718 Capsella grandiflora
Cagra.0053s0002 5.0kb upstream 5.0kb upstream 2718 true Scaffold53: 1-2718 Capsella grandiflora
Cagra.0053s0002 5.0kb upstream 5.0kb upstream 2235 false Scaffold53: 1-2235 Capsella grandiflora
Cagra.0053s0002 5.0kb downstream 5.0kb downstream 5483 true Scaffold53: 2236-7718 Capsella grandiflora
Cagra.0053s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold53: 2719-7718 Capsella grandiflora
Cagra.0053s0002 10.0kb upstream 10.0kb upstream 2718 true Scaffold53: 1-2718 Capsella grandiflora
Cagra.0053s0002 10.0kb upstream 10.0kb upstream 2235 false Scaffold53: 1-2235 Capsella grandiflora
Cagra.0053s0002 10.0kb downstream 10.0kb downstream 10483 true Scaffold53: 2236-12718 Capsella grandiflora
Cagra.0053s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold53: 2719-12718 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373879 5261 Brassicaceae View MSA
123841465 5264 Brassicales-Malvales View MSA
124322935 5266 SBM View MSA
124252720 5268 Malvidae View MSA
124072251 5270 Rosid View MSA
123752988 5271 Pentapetalae View MSA
122797955 5272 Eudicot View MSA
122045805 5273 Angiosperm View MSA
121350645 5274 Embryophyte View MSA
123381836 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain