Gene : MD09G1044400 M. domestica v1.1
Defline:  (1 of 2) PF00098//PF00665//PF07727//PF14227 - Zinc knuckle (zf-CCHC) // Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // gag-polypeptide of LTR copia-type (UBN2_2) Genomic Order:  413
Name:  ? MD09G1044400 Secondary Identifier:  ? PAC:40104479
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
MD09G1044400 0.5kb upstream 0.5kb upstream 5638 true Chr09: 2874563-2880200 Malus domestica
MD09G1044400 0.5kb upstream 0.5kb upstream 500 false Chr09: 2874563-2875062 Malus domestica
MD09G1044400 0.5kb downstream 0.5kb downstream 5638 true Chr09: 2875063-2880700 Malus domestica
MD09G1044400 0.5kb downstream 0.5kb downstream 500 false Chr09: 2880201-2880700 Malus domestica
MD09G1044400 1.0kb upstream 1.0kb upstream 6138 true Chr09: 2874063-2880200 Malus domestica
MD09G1044400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 2874063-2875062 Malus domestica
MD09G1044400 1.0kb downstream 1.0kb downstream 6138 true Chr09: 2875063-2881200 Malus domestica
MD09G1044400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 2880201-2881200 Malus domestica
MD09G1044400 2.0kb upstream 2.0kb upstream 7138 true Chr09: 2873063-2880200 Malus domestica
MD09G1044400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 2873063-2875062 Malus domestica
MD09G1044400 2.0kb downstream 2.0kb downstream 7138 true Chr09: 2875063-2882200 Malus domestica
MD09G1044400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 2880201-2882200 Malus domestica
MD09G1044400 5.0kb upstream 5.0kb upstream 10138 true Chr09: 2870063-2880200 Malus domestica
MD09G1044400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 2870063-2875062 Malus domestica
MD09G1044400 5.0kb downstream 5.0kb downstream 10138 true Chr09: 2875063-2885200 Malus domestica
MD09G1044400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 2880201-2885200 Malus domestica
MD09G1044400 10.0kb upstream 10.0kb upstream 15138 true Chr09: 2865063-2880200 Malus domestica
MD09G1044400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 2865063-2875062 Malus domestica
MD09G1044400 10.0kb downstream 10.0kb downstream 15138 true Chr09: 2875063-2890200 Malus domestica
MD09G1044400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 2880201-2890200 Malus domestica

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029855 5273 Angiosperm View MSA
122237559 5265 Fabidae View MSA
124038205 5270 Rosid View MSA
123753008 5271 Pentapetalae View MSA
122774914 5272 Eudicot View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

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