Gene : MD09G1044700 M. domestica v1.1
Defline:  (1 of 2) PF00098//PF00665//PF07727//PF13976//PF14227 - Zinc knuckle (zf-CCHC) // Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2_2) Genomic Order:  416
Name:  ? MD09G1044700 Secondary Identifier:  ? PAC:40104978
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
MD09G1044700 0.5kb upstream 0.5kb upstream 5562 true Chr09: 2891707-2897268 Malus domestica
MD09G1044700 0.5kb upstream 0.5kb upstream 500 false Chr09: 2896769-2897268 Malus domestica
MD09G1044700 0.5kb downstream 0.5kb downstream 5562 true Chr09: 2891207-2896768 Malus domestica
MD09G1044700 0.5kb downstream 0.5kb downstream 500 false Chr09: 2891207-2891706 Malus domestica
MD09G1044700 1.0kb upstream 1.0kb upstream 6062 true Chr09: 2891707-2897768 Malus domestica
MD09G1044700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 2896769-2897768 Malus domestica
MD09G1044700 1.0kb downstream 1.0kb downstream 6062 true Chr09: 2890707-2896768 Malus domestica
MD09G1044700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 2890707-2891706 Malus domestica
MD09G1044700 2.0kb upstream 2.0kb upstream 7062 true Chr09: 2891707-2898768 Malus domestica
MD09G1044700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 2896769-2898768 Malus domestica
MD09G1044700 2.0kb downstream 2.0kb downstream 7062 true Chr09: 2889707-2896768 Malus domestica
MD09G1044700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 2889707-2891706 Malus domestica
MD09G1044700 5.0kb upstream 5.0kb upstream 10062 true Chr09: 2891707-2901768 Malus domestica
MD09G1044700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 2896769-2901768 Malus domestica
MD09G1044700 5.0kb downstream 5.0kb downstream 10062 true Chr09: 2886707-2896768 Malus domestica
MD09G1044700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 2886707-2891706 Malus domestica
MD09G1044700 10.0kb upstream 10.0kb upstream 15062 true Chr09: 2891707-2906768 Malus domestica
MD09G1044700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 2896769-2906768 Malus domestica
MD09G1044700 10.0kb downstream 10.0kb downstream 15062 true Chr09: 2881707-2896768 Malus domestica
MD09G1044700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 2881707-2891706 Malus domestica

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029855 5273 Angiosperm View MSA
122237559 5265 Fabidae View MSA
124038205 5270 Rosid View MSA
123753008 5271 Pentapetalae View MSA
122774914 5272 Eudicot View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

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