Gene : Ca_27409 C. arietinum v1.0

Defline:  (1 of 1) PTHR13110//PTHR13110:SF2 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 // SUBFAMILY NOT NAMED Genomic Order:  1
Name:  ? Ca_27409 Secondary Identifier:  ? PAC:40149105

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_27409 0.5kb upstream 0.5kb upstream 838 true scaffold1651: 1561-2398 Cicer arietinum
Ca_27409 0.5kb upstream 0.5kb upstream 500 false scaffold1651: 1899-2398 Cicer arietinum
Ca_27409 0.5kb downstream 0.5kb downstream 838 true scaffold1651: 1061-1898 Cicer arietinum
Ca_27409 0.5kb downstream 0.5kb downstream 500 false scaffold1651: 1061-1560 Cicer arietinum
Ca_27409 1.0kb upstream 1.0kb upstream 1338 true scaffold1651: 1561-2898 Cicer arietinum
Ca_27409 1.0kb upstream 1.0kb upstream 1000 false scaffold1651: 1899-2898 Cicer arietinum
Ca_27409 1.0kb downstream 1.0kb downstream 1338 true scaffold1651: 561-1898 Cicer arietinum
Ca_27409 1.0kb downstream 1.0kb downstream 1000 false scaffold1651: 561-1560 Cicer arietinum
Ca_27409 2.0kb upstream 2.0kb upstream 2338 true scaffold1651: 1561-3898 Cicer arietinum
Ca_27409 2.0kb upstream 2.0kb upstream 2000 false scaffold1651: 1899-3898 Cicer arietinum
Ca_27409 2.0kb downstream 2.0kb downstream 1898 true scaffold1651: 1-1898 Cicer arietinum
Ca_27409 2.0kb downstream 2.0kb downstream 1560 false scaffold1651: 1-1560 Cicer arietinum
Ca_27409 5.0kb upstream 5.0kb upstream 5338 true scaffold1651: 1561-6898 Cicer arietinum
Ca_27409 5.0kb upstream 5.0kb upstream 5000 false scaffold1651: 1899-6898 Cicer arietinum
Ca_27409 5.0kb downstream 5.0kb downstream 1898 true scaffold1651: 1-1898 Cicer arietinum
Ca_27409 5.0kb downstream 5.0kb downstream 1560 false scaffold1651: 1-1560 Cicer arietinum
Ca_27409 10.0kb upstream 10.0kb upstream 10338 true scaffold1651: 1561-11898 Cicer arietinum
Ca_27409 10.0kb upstream 10.0kb upstream 10000 false scaffold1651: 1899-11898 Cicer arietinum
Ca_27409 10.0kb downstream 10.0kb downstream 1898 true scaffold1651: 1-1898 Cicer arietinum
Ca_27409 10.0kb downstream 10.0kb downstream 1560 false scaffold1651: 1-1560 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122218652 5265 Fabidae View MSA
124074567 5270 Rosid View MSA
123743575 5271 Pentapetalae View MSA
122788488 5272 Eudicot View MSA
122047292 5273 Angiosperm View MSA
121345719 5274 Embryophyte View MSA
123424413 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain