Gene : Ca_23523 C. arietinum v1.0

Defline:  (1 of 2) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Genomic Order:  711
Name:  ? Ca_23523 Secondary Identifier:  ? PAC:40162849

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ca_23523 0.5kb upstream 0.5kb upstream 6018 true Ca5: 19502920-19508937 Cicer arietinum
Ca_23523 0.5kb upstream 0.5kb upstream 500 false Ca5: 19508438-19508937 Cicer arietinum
Ca_23523 0.5kb downstream 0.5kb downstream 6018 true Ca5: 19502420-19508437 Cicer arietinum
Ca_23523 0.5kb downstream 0.5kb downstream 500 false Ca5: 19502420-19502919 Cicer arietinum
Ca_23523 1.0kb upstream 1.0kb upstream 6518 true Ca5: 19502920-19509437 Cicer arietinum
Ca_23523 1.0kb upstream 1.0kb upstream 1000 false Ca5: 19508438-19509437 Cicer arietinum
Ca_23523 1.0kb downstream 1.0kb downstream 6518 true Ca5: 19501920-19508437 Cicer arietinum
Ca_23523 1.0kb downstream 1.0kb downstream 1000 false Ca5: 19501920-19502919 Cicer arietinum
Ca_23523 2.0kb upstream 2.0kb upstream 7518 true Ca5: 19502920-19510437 Cicer arietinum
Ca_23523 2.0kb upstream 2.0kb upstream 2000 false Ca5: 19508438-19510437 Cicer arietinum
Ca_23523 2.0kb downstream 2.0kb downstream 7518 true Ca5: 19500920-19508437 Cicer arietinum
Ca_23523 2.0kb downstream 2.0kb downstream 2000 false Ca5: 19500920-19502919 Cicer arietinum
Ca_23523 5.0kb upstream 5.0kb upstream 10518 true Ca5: 19502920-19513437 Cicer arietinum
Ca_23523 5.0kb upstream 5.0kb upstream 5000 false Ca5: 19508438-19513437 Cicer arietinum
Ca_23523 5.0kb downstream 5.0kb downstream 10518 true Ca5: 19497920-19508437 Cicer arietinum
Ca_23523 5.0kb downstream 5.0kb downstream 5000 false Ca5: 19497920-19502919 Cicer arietinum
Ca_23523 10.0kb upstream 10.0kb upstream 15518 true Ca5: 19502920-19518437 Cicer arietinum
Ca_23523 10.0kb upstream 10.0kb upstream 10000 false Ca5: 19508438-19518437 Cicer arietinum
Ca_23523 10.0kb downstream 10.0kb downstream 15518 true Ca5: 19492920-19508437 Cicer arietinum
Ca_23523 10.0kb downstream 10.0kb downstream 10000 false Ca5: 19492920-19502919 Cicer arietinum

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309938 5265 Fabidae View MSA
124068790 5270 Rosid View MSA
123750748 5271 Pentapetalae View MSA
122786730 5272 Eudicot View MSA
122043550 5273 Angiosperm View MSA
121310146 5274 Embryophyte View MSA
123347715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain