Gene : HanXRQChr02g0044831 H. annuus r1.2
Defline:  (1 of 9) PF00124//PF00421 - Photosynthetic reaction centre protein (Photo_RC) // Photosystem II protein (PSII) Genomic Order:  1225
Name:  ? HanXRQChr02g0044831 Secondary Identifier:  ? PAC:40340261
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hannuus PHOTOALL-PWY Helianthus annuus pathologic  
Hannuus PWY-101 Helianthus annuus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr02g0044831 0.5kb upstream 0.5kb upstream 2903   true HanXRQChr02: 104340780-104343682 Helianthus annuus
HanXRQChr02g0044831 0.5kb upstream 0.5kb upstream 500   false HanXRQChr02: 104343183-104343682 Helianthus annuus
HanXRQChr02g0044831 0.5kb downstream 0.5kb downstream 2903   true HanXRQChr02: 104340280-104343182 Helianthus annuus
HanXRQChr02g0044831 0.5kb downstream 0.5kb downstream 500   false HanXRQChr02: 104340280-104340779 Helianthus annuus
HanXRQChr02g0044831 1.0kb upstream 1.0kb upstream 3403   true HanXRQChr02: 104340780-104344182 Helianthus annuus
HanXRQChr02g0044831 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr02: 104343183-104344182 Helianthus annuus
HanXRQChr02g0044831 1.0kb downstream 1.0kb downstream 3403   true HanXRQChr02: 104339780-104343182 Helianthus annuus
HanXRQChr02g0044831 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr02: 104339780-104340779 Helianthus annuus
HanXRQChr02g0044831 2.0kb upstream 2.0kb upstream 4403   true HanXRQChr02: 104340780-104345182 Helianthus annuus
HanXRQChr02g0044831 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr02: 104343183-104345182 Helianthus annuus
HanXRQChr02g0044831 2.0kb downstream 2.0kb downstream 4403   true HanXRQChr02: 104338780-104343182 Helianthus annuus
HanXRQChr02g0044831 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr02: 104338780-104340779 Helianthus annuus
HanXRQChr02g0044831 5.0kb upstream 5.0kb upstream 7403   true HanXRQChr02: 104340780-104348182 Helianthus annuus
HanXRQChr02g0044831 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr02: 104343183-104348182 Helianthus annuus
HanXRQChr02g0044831 5.0kb downstream 5.0kb downstream 7403   true HanXRQChr02: 104335780-104343182 Helianthus annuus
HanXRQChr02g0044831 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr02: 104335780-104340779 Helianthus annuus
HanXRQChr02g0044831 10.0kb upstream 10.0kb upstream 12403   true HanXRQChr02: 104340780-104353182 Helianthus annuus
HanXRQChr02g0044831 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr02: 104343183-104353182 Helianthus annuus
HanXRQChr02g0044831 10.0kb downstream 10.0kb downstream 12403   true HanXRQChr02: 104330780-104343182 Helianthus annuus
HanXRQChr02g0044831 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr02: 104330780-104340779 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475463 5263 Asterids View MSA
123751197 5271 Pentapetalae View MSA
122773946 5272 Eudicot View MSA
122051576 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121350250 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain