Gene : HanXRQChr04g0117681 H. annuus r1.2
Defline:  (1 of 4) K03086 - RNA polymerase primary sigma factor (SIG1, rpoD) Genomic Order:  2130
Name:  ? HanXRQChr04g0117681 Secondary Identifier:  ? PAC:40305621
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HanXRQChr04g0117681 0.5kb upstream 0.5kb upstream 5353   true HanXRQChr04: 142690165-142695517 Helianthus annuus
HanXRQChr04g0117681 0.5kb upstream 0.5kb upstream 500   false HanXRQChr04: 142695018-142695517 Helianthus annuus
HanXRQChr04g0117681 0.5kb downstream 0.5kb downstream 5353   true HanXRQChr04: 142689665-142695017 Helianthus annuus
HanXRQChr04g0117681 0.5kb downstream 0.5kb downstream 500   false HanXRQChr04: 142689665-142690164 Helianthus annuus
HanXRQChr04g0117681 1.0kb upstream 1.0kb upstream 5853   true HanXRQChr04: 142690165-142696017 Helianthus annuus
HanXRQChr04g0117681 1.0kb upstream 1.0kb upstream 1000   false HanXRQChr04: 142695018-142696017 Helianthus annuus
HanXRQChr04g0117681 1.0kb downstream 1.0kb downstream 5853   true HanXRQChr04: 142689165-142695017 Helianthus annuus
HanXRQChr04g0117681 1.0kb downstream 1.0kb downstream 1000   false HanXRQChr04: 142689165-142690164 Helianthus annuus
HanXRQChr04g0117681 2.0kb upstream 2.0kb upstream 6853   true HanXRQChr04: 142690165-142697017 Helianthus annuus
HanXRQChr04g0117681 2.0kb upstream 2.0kb upstream 2000   false HanXRQChr04: 142695018-142697017 Helianthus annuus
HanXRQChr04g0117681 2.0kb downstream 2.0kb downstream 6853   true HanXRQChr04: 142688165-142695017 Helianthus annuus
HanXRQChr04g0117681 2.0kb downstream 2.0kb downstream 2000   false HanXRQChr04: 142688165-142690164 Helianthus annuus
HanXRQChr04g0117681 5.0kb upstream 5.0kb upstream 9853   true HanXRQChr04: 142690165-142700017 Helianthus annuus
HanXRQChr04g0117681 5.0kb upstream 5.0kb upstream 5000   false HanXRQChr04: 142695018-142700017 Helianthus annuus
HanXRQChr04g0117681 5.0kb downstream 5.0kb downstream 9853   true HanXRQChr04: 142685165-142695017 Helianthus annuus
HanXRQChr04g0117681 5.0kb downstream 5.0kb downstream 5000   false HanXRQChr04: 142685165-142690164 Helianthus annuus
HanXRQChr04g0117681 10.0kb upstream 10.0kb upstream 14853   true HanXRQChr04: 142690165-142705017 Helianthus annuus
HanXRQChr04g0117681 10.0kb upstream 10.0kb upstream 10000   false HanXRQChr04: 142695018-142705017 Helianthus annuus
HanXRQChr04g0117681 10.0kb downstream 10.0kb downstream 14853   true HanXRQChr04: 142680165-142695017 Helianthus annuus
HanXRQChr04g0117681 10.0kb downstream 10.0kb downstream 10000   false HanXRQChr04: 142680165-142690164 Helianthus annuus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473484 5263 Asterids View MSA
123751307 5271 Pentapetalae View MSA
122790419 5272 Eudicot View MSA
122046988 5273 Angiosperm View MSA
121346903 5274 Embryophyte View MSA
123428711 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain