Gene : Pahal.2G231400 P. hallii v3.1

Defline:  (1 of 1) K12821 - pre-mRNA-processing factor 40 (PRPF40, PRP40) Genomic Order:  1788
Name:  ? Pahal.2G231400 Secondary Identifier:  ? PAC:40386090

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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.2G231400 0.5kb upstream 0.5kb upstream 14669 true Chr02: 39116812-39131480 Panicum hallii
Pahal.2G231400 0.5kb upstream 0.5kb upstream 500 false Chr02: 39130981-39131480 Panicum hallii
Pahal.2G231400 0.5kb downstream 0.5kb downstream 14669 true Chr02: 39116312-39130980 Panicum hallii
Pahal.2G231400 0.5kb downstream 0.5kb downstream 500 false Chr02: 39116312-39116811 Panicum hallii
Pahal.2G231400 1.0kb upstream 1.0kb upstream 15169 true Chr02: 39116812-39131980 Panicum hallii
Pahal.2G231400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 39130981-39131980 Panicum hallii
Pahal.2G231400 1.0kb downstream 1.0kb downstream 15169 true Chr02: 39115812-39130980 Panicum hallii
Pahal.2G231400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 39115812-39116811 Panicum hallii
Pahal.2G231400 2.0kb upstream 2.0kb upstream 16169 true Chr02: 39116812-39132980 Panicum hallii
Pahal.2G231400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 39130981-39132980 Panicum hallii
Pahal.2G231400 2.0kb downstream 2.0kb downstream 16169 true Chr02: 39114812-39130980 Panicum hallii
Pahal.2G231400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 39114812-39116811 Panicum hallii
Pahal.2G231400 5.0kb upstream 5.0kb upstream 19169 true Chr02: 39116812-39135980 Panicum hallii
Pahal.2G231400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 39130981-39135980 Panicum hallii
Pahal.2G231400 5.0kb downstream 5.0kb downstream 19169 true Chr02: 39111812-39130980 Panicum hallii
Pahal.2G231400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 39111812-39116811 Panicum hallii
Pahal.2G231400 10.0kb upstream 10.0kb upstream 24169 true Chr02: 39116812-39140980 Panicum hallii
Pahal.2G231400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 39130981-39140980 Panicum hallii
Pahal.2G231400 10.0kb downstream 10.0kb downstream 24169 true Chr02: 39106812-39130980 Panicum hallii
Pahal.2G231400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 39106812-39116811 Panicum hallii

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180105 5267 Panicoideae View MSA
124583371 5269 Grass View MSA
122049454 5273 Angiosperm View MSA
121347556 5274 Embryophyte View MSA
123423988 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain