Gene : Glyma.05G003400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24012:SF426 - RNA-BINDING PROTEIN-RELATED Genomic Order:  34
Name:  ? Glyma.05G003400 Secondary Identifier:  ? PAC:30525117
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G003400 0.5kb upstream 0.5kb upstream 4285 true Chr05: 237351-241635 Glycine max
Glyma.05G003400 0.5kb upstream 0.5kb upstream 500 false Chr05: 241136-241635 Glycine max
Glyma.05G003400 0.5kb downstream 0.5kb downstream 4285 true Chr05: 236851-241135 Glycine max
Glyma.05G003400 0.5kb downstream 0.5kb downstream 500 false Chr05: 236851-237350 Glycine max
Glyma.05G003400 1.0kb upstream 1.0kb upstream 4785 true Chr05: 237351-242135 Glycine max
Glyma.05G003400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 241136-242135 Glycine max
Glyma.05G003400 1.0kb downstream 1.0kb downstream 4785 true Chr05: 236351-241135 Glycine max
Glyma.05G003400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 236351-237350 Glycine max
Glyma.05G003400 2.0kb upstream 2.0kb upstream 5785 true Chr05: 237351-243135 Glycine max
Glyma.05G003400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 241136-243135 Glycine max
Glyma.05G003400 2.0kb downstream 2.0kb downstream 5785 true Chr05: 235351-241135 Glycine max
Glyma.05G003400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 235351-237350 Glycine max
Glyma.05G003400 5.0kb upstream 5.0kb upstream 8785 true Chr05: 237351-246135 Glycine max
Glyma.05G003400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 241136-246135 Glycine max
Glyma.05G003400 5.0kb downstream 5.0kb downstream 8785 true Chr05: 232351-241135 Glycine max
Glyma.05G003400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 232351-237350 Glycine max
Glyma.05G003400 10.0kb upstream 10.0kb upstream 13785 true Chr05: 237351-251135 Glycine max
Glyma.05G003400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 241136-251135 Glycine max
Glyma.05G003400 10.0kb downstream 10.0kb downstream 13785 true Chr05: 227351-241135 Glycine max
Glyma.05G003400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 227351-237350 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311921 5265 Fabidae View MSA
124068966 5270 Rosid View MSA
123749875 5271 Pentapetalae View MSA
122795873 5272 Eudicot View MSA
122049849 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351304 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.3715 0.0 63.2691    
cufflinks 16.4331 0.0 56.9635    
cufflinks 17.675 0.0 60.8294    
cufflinks 14.9016 0.0 51.6659    
cufflinks 15.7806 0.0 55.1325    
cufflinks 11.9398 0.0 42.3469   Low
cufflinks 22.7951 0.0 78.4796 High High
cufflinks 15.8161 0.0 54.7017    
cufflinks 17.5063 0.0 60.3115    
cufflinks 3.366       Low
cufflinks 4.16        
cufflinks 5.673       High
cufflinks 3.813        
cufflinks 5.196       High
cufflinks 4.628        
cufflinks 3.564        
cufflinks 3.183       Low
cufflinks 4.821        
cufflinks 4.828        
cufflinks 3.877        
cufflinks 3.202       Low
cufflinks 4.22        
cufflinks 4.773        
cufflinks 3.341       Low
cufflinks 3.711        
cufflinks 3.647        

0 Strain