Gene : Glyma.06G073200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11477:SF17 - PROTEIN PARTNER OF SNF Genomic Order:  732
Name:  ? Glyma.06G073200 Secondary Identifier:  ? PAC:30550861
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G073200 0.5kb upstream 0.5kb upstream 7314 true Chr06: 5643640-5650953 Glycine max
Glyma.06G073200 0.5kb upstream 0.5kb upstream 500 false Chr06: 5643640-5644139 Glycine max
Glyma.06G073200 0.5kb downstream 0.5kb downstream 7314 true Chr06: 5644140-5651453 Glycine max
Glyma.06G073200 0.5kb downstream 0.5kb downstream 500 false Chr06: 5650954-5651453 Glycine max
Glyma.06G073200 1.0kb upstream 1.0kb upstream 7814 true Chr06: 5643140-5650953 Glycine max
Glyma.06G073200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 5643140-5644139 Glycine max
Glyma.06G073200 1.0kb downstream 1.0kb downstream 7814 true Chr06: 5644140-5651953 Glycine max
Glyma.06G073200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 5650954-5651953 Glycine max
Glyma.06G073200 2.0kb upstream 2.0kb upstream 8814 true Chr06: 5642140-5650953 Glycine max
Glyma.06G073200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 5642140-5644139 Glycine max
Glyma.06G073200 2.0kb downstream 2.0kb downstream 8814 true Chr06: 5644140-5652953 Glycine max
Glyma.06G073200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 5650954-5652953 Glycine max
Glyma.06G073200 5.0kb upstream 5.0kb upstream 11814 true Chr06: 5639140-5650953 Glycine max
Glyma.06G073200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 5639140-5644139 Glycine max
Glyma.06G073200 5.0kb downstream 5.0kb downstream 11814 true Chr06: 5644140-5655953 Glycine max
Glyma.06G073200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 5650954-5655953 Glycine max
Glyma.06G073200 10.0kb upstream 10.0kb upstream 16814 true Chr06: 5634140-5650953 Glycine max
Glyma.06G073200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 5634140-5644139 Glycine max
Glyma.06G073200 10.0kb downstream 10.0kb downstream 16814 true Chr06: 5644140-5660953 Glycine max
Glyma.06G073200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 5650954-5660953 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308556 5265 Fabidae View MSA
124063305 5270 Rosid View MSA
123742166 5271 Pentapetalae View MSA
122788030 5272 Eudicot View MSA
122051575 5273 Angiosperm View MSA
121345447 5274 Embryophyte View MSA
123423935 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.626 0.0 34.3011   High
cufflinks 8.10451 0.0 21.6424    
cufflinks 10.857 0.0 29.2805    
cufflinks 9.19907 0.0 24.6403    
cufflinks 8.54153 0.0 22.8299    
cufflinks 5.92809 0.0 15.8386   Low
cufflinks 12.25 0.0 33.2028   High
cufflinks 7.75662 0.0 20.7055    
cufflinks 9.20285 0.0 24.6448    
cufflinks 3.789       Low
cufflinks 7.702     High  
cufflinks 6.861        
cufflinks 4.212       Low
cufflinks 4.931       Low
cufflinks 7.778     High  
cufflinks 7.164     High  
cufflinks 4.449       Low
cufflinks 6.208        
cufflinks 6.034        
cufflinks 8.198     High High
cufflinks 6.295     High  
cufflinks 8.081     High High
cufflinks 8.159     High High
cufflinks 7.605     High  
cufflinks 7.05     High  
cufflinks 5.72        

0 Strain