Protein Family : SPOC domain / Transcription elongation factor S-II protein 123742166

Method ID:  5271 Method Name:  Pentapetalae
Sequence Alignment:  View MSA Member Count:  62

62 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
27942.t000005 (1 of 1) PTHR11477:SF17 - PROTEIN PARTNER OF SNF R. communis v0.1 4804   27942: 55741-60544
Cucsa.310590 (1 of 1) PTHR11477:SF17 - PROTEIN PARTNER OF SNF C. sativus v1.0 6440   scaffold02995: 346519-352958
orange1.1g001177m.g (1 of 1) PTHR11477:SF17 - PROTEIN PARTNER OF SNF C. sinensis v1.1 5704   scaffold00005: 195875-201578
AT5G11430 (1 of 3) PTHR11477:SF17 - PROTEIN PARTNER OF SNF A. thaliana TAIR10 4351   Chr5: 3648054-3652404
AT5G25520 (1 of 1) KOG1634 - Predicted transcription factor DATF1, contains PHD and TFS2M domains A. thaliana TAIR10 4533   Chr5: 8885088-8889620
Thhalv10012648m.g (1 of 2) PTHR11477:SF17 - PROTEIN PARTNER OF SNF E. salsugineum v1.0 4576   scaffold_2: 3701542-3706117
Ciclev10007403m.g (1 of 1) PTHR11477:SF17 - PROTEIN PARTNER OF SNF C. clementina v1.0 4418   scaffold_1: 2566453-2570870
Lus10013146.g (1 of 2) PTHR11477:SF17 - PROTEIN PARTNER OF SNF L. usitatissimum v1.0 3641   scaffold359: 222739-226379
Lus10008108.g (1 of 2) PTHR11477:SF17 - PROTEIN PARTNER OF SNF L. usitatissimum v1.0 3623   scaffold524: 159817-163439
Gorai.004G274700 (1 of 2) PTHR11477:SF17 - PROTEIN PARTNER OF SNF G. raimondii v2.1 5435   Chr04: 60886820-60892254
Gorai.009G011500 (1 of 2) PTHR11477:SF17 - PROTEIN PARTNER OF SNF G. raimondii v2.1 5915   Chr09: 948852-954766
Thecc1EG038305 (1 of 1) PTHR11477:SF17 - PROTEIN PARTNER OF SNF T. cacao v1.1 6787   scaffold_9: 8364189-8370975
Migut.A00276 (1 of 1) PTHR11477:SF17 - PROTEIN PARTNER OF SNF M. guttatus v2.0 5464   scaffold_1: 1359454-1364917
Araha.10440s0002 (1 of 1) PTHR11477//PTHR11477:SF8 - TRANSCRIPTION ELONGATION FACTOR S-II A. halleri v1.1 3813   Scaffold10440: 6353-10165
Araha.19790s0006 (1 of 1) KOG1634 - Predicted transcription factor DATF1, contains PHD and TFS2M domains A. halleri v1.1 4842   Scaffold19790: 24505-29346
Araha.7834s0001 (1 of 2) PTHR11477:SF17 - PROTEIN PARTNER OF SNF A. halleri v1.1 3773   Scaffold7834: 2394-6166
Cagra.0701s0013 (1 of 1) KOG1634 - Predicted transcription factor DATF1, contains PHD and TFS2M domains C. grandiflora v1.1 4608   Scaffold701: 39117-43724
Cagra.7526s0011 (1 of 2) PTHR11477:SF17 - PROTEIN PARTNER OF SNF C. grandiflora v1.1 3820   Scaffold7526: 51622-55441
Glyma.06G073200 (1 of 2) PTHR11477:SF17 - PROTEIN PARTNER OF SNF G. max Wm82.a2.v1 6814   Chr06: 5644140-5650953
Glyma.04G071900 (1 of 2) PTHR11477:SF17 - PROTEIN PARTNER OF SNF G. max Wm82.a2.v1 5745   Chr04: 5999356-6005100
Brara.F02747 (1 of 3) PTHR11477:SF17 - PROTEIN PARTNER OF SNF B. rapa FPsc v1.3 4564   A06: 22561573-22566136
Brara.D01547 (1 of 3) PTHR11477:SF17 - PROTEIN PARTNER OF SNF B. rapa FPsc v1.3 3402   A04: 13787471-13790872
Brara.J02228 (1 of 3) PTHR11477:SF17 - PROTEIN PARTNER OF SNF B. rapa FPsc v1.3 4446   A10: 16787477-16791922
Bostr.29827s0256 (1 of 1) KOG1634 - Predicted transcription factor DATF1, contains PHD and TFS2M domains B. stricta v1.2 4859   Scaffold29827: 2656435-2661293
Bostr.20055s0095 (1 of 3) PTHR11477:SF17 - PROTEIN PARTNER OF SNF B. stricta v1.2 3882   Scaffold20055: 422384-426265
Bostr.26326s0091 (1 of 3) PTHR11477:SF17 - PROTEIN PARTNER OF SNF B. stricta v1.2 3888   Scaffold26326: 1198921-1202808
Medtr3g108010 (1 of 1) PTHR11477:SF17 - PROTEIN PARTNER OF SNF M. truncatula Mt4.0v1 6240   chr3: 49909087-49915326
SapurV1A.0073s0050 (1 of 1) PTHR11477//PTHR11477:SF17//PTHR11477:SF8 - TRANSCRIPTION ELONGATION FACTOR S-II // PROTEIN PARTNER OF SNF // SUBFAMILY NOT NAMED S. purpurea v1.0 6926   chr18: 3003625-3010550
SapurV1A.0043s0080 (1 of 1) PTHR11477//PTHR11477:SF17 - TRANSCRIPTION ELONGATION FACTOR S-II // PROTEIN PARTNER OF SNF S. purpurea v1.0 4445   chr06: 23545886-23550330
Eucgr.C01815 (1 of 1) PTHR11477:SF17 - PROTEIN PARTNER OF SNF E. grandis v2.0 6612   Chr03: 28183919-28190530

62 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
27942.m000158 R. communis v0.1 123742166 SPOC domain / Transcription elongation factor S-II protein 1 5271 Pentapetalae
AT5G11430.1 A. thaliana TAIR10 123742166 SPOC domain / Transcription elongation factor S-II protein 2 5271 Pentapetalae
Thhalv10012648m E. salsugineum v1.0 123742166 SPOC domain / Transcription elongation factor S-II protein 1 5271 Pentapetalae
Lus10013146 L. usitatissimum v1.0 123742166 SPOC domain / Transcription elongation factor S-II protein 2 5271 Pentapetalae
Thecc1EG038305t1 T. cacao v1.1 123742166 SPOC domain / Transcription elongation factor S-II protein 1 5271 Pentapetalae
Migut.A00276.1.p M. guttatus v2.0 123742166 SPOC domain / Transcription elongation factor S-II protein 1 5271 Pentapetalae
Glyma.04G071900.1.p G. max Wm82.a2.v1 123742166 SPOC domain / Transcription elongation factor S-II protein 2 5271 Pentapetalae
Glyma.06G073200.1.p G. max Wm82.a2.v1 123742166 SPOC domain / Transcription elongation factor S-II protein 2 5271 Pentapetalae
Brara.D01547.1.p B. rapa FPsc v1.3 123742166 SPOC domain / Transcription elongation factor S-II protein 3 5271 Pentapetalae
Bostr.20055s0095.1.p B. stricta v1.2 123742166 SPOC domain / Transcription elongation factor S-II protein 3 5271 Pentapetalae
Bostr.29827s0256.1.p B. stricta v1.2 123742166 SPOC domain / Transcription elongation factor S-II protein 3 5271 Pentapetalae
SapurV1A.0043s0080.1.p S. purpurea v1.0 123742166 SPOC domain / Transcription elongation factor S-II protein 2 5271 Pentapetalae
Eucgr.C01815.1.p E. grandis v2.0 123742166 SPOC domain / Transcription elongation factor S-II protein 1 5271 Pentapetalae
Kalax.0820s0012.1.p K. laxiflora v1.1 123742166 SPOC domain / Transcription elongation factor S-II protein 4 5271 Pentapetalae
Kalax.0361s0006.1.p K. laxiflora v1.1 123742166 SPOC domain / Transcription elongation factor S-II protein 4 5271 Pentapetalae
Kalax.0170s0046.1.p K. laxiflora v1.1 123742166 SPOC domain / Transcription elongation factor S-II protein 4 5271 Pentapetalae
Kaladp0029s0071.1.p K. fedtschenkoi v1.1 123742166 SPOC domain / Transcription elongation factor S-II protein 2 5271 Pentapetalae
Kaladp1006s0028.1.p K. fedtschenkoi v1.1 123742166 SPOC domain / Transcription elongation factor S-II protein 2 5271 Pentapetalae
AL6G22090.t1 A. lyrata v2.1 123742166 SPOC domain / Transcription elongation factor S-II protein 3 5271 Pentapetalae
AL6G37320.t1 A. lyrata v2.1 123742166 SPOC domain / Transcription elongation factor S-II protein 3 5271 Pentapetalae
DCAR_023265 D. carota v2.0 123742166 SPOC domain / Transcription elongation factor S-II protein 1 5271 Pentapetalae
Solyc08g067790.2.1 S. lycopersicum ITAG2.4 123742166 SPOC domain / Transcription elongation factor S-II protein 1 5271 Pentapetalae
AUR62032378-RA C. quinoa v1.0 123742166 SPOC domain / Transcription elongation factor S-II protein 2 5271 Pentapetalae
Podel.18G034900.1.p P. deltoides WV94 v2.1 123742166 SPOC domain / Transcription elongation factor S-II protein 2 5271 Pentapetalae
Podel.06G260300.1.p P. deltoides WV94 v2.1 123742166 SPOC domain / Transcription elongation factor S-II protein 2 5271 Pentapetalae
PGSC0003DMP400056110 S. tuberosum v4.03 123742166 SPOC domain / Transcription elongation factor S-II protein 1 5271 Pentapetalae
HanXRQChr13g0409611 H. annuus r1.2 123742166 SPOC domain / Transcription elongation factor S-II protein 2 5271 Pentapetalae
HanXRQChr03g0078061 H. annuus r1.2 123742166 SPOC domain / Transcription elongation factor S-II protein 2 5271 Pentapetalae
gene01048-v1.0-hybrid.t1 F. vesca v2.0.a2 123742166 SPOC domain / Transcription elongation factor S-II protein 1 5271 Pentapetalae
Cucsa.310590.1 C. sativus v1.0 123742166 SPOC domain / Transcription elongation factor S-II protein 1 5271 Pentapetalae