Gene : Eucgr.C01815 E. grandis v2.0
Defline:  (1 of 1) PTHR11477:SF17 - PROTEIN PARTNER OF SNF Genomic Order:  1308
Name:  ? Eucgr.C01815 Secondary Identifier:  ? PAC:32040106
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01815 0.5kb upstream 0.5kb upstream 7112 true Chr03: 28183919-28191030 Eucalyptus grandis
Eucgr.C01815 0.5kb upstream 0.5kb upstream 500 false Chr03: 28190531-28191030 Eucalyptus grandis
Eucgr.C01815 0.5kb downstream 0.5kb downstream 7112 true Chr03: 28183419-28190530 Eucalyptus grandis
Eucgr.C01815 0.5kb downstream 0.5kb downstream 500 false Chr03: 28183419-28183918 Eucalyptus grandis
Eucgr.C01815 1.0kb upstream 1.0kb upstream 7612 true Chr03: 28183919-28191530 Eucalyptus grandis
Eucgr.C01815 1.0kb upstream 1.0kb upstream 1000 false Chr03: 28190531-28191530 Eucalyptus grandis
Eucgr.C01815 1.0kb downstream 1.0kb downstream 7612 true Chr03: 28182919-28190530 Eucalyptus grandis
Eucgr.C01815 1.0kb downstream 1.0kb downstream 1000 false Chr03: 28182919-28183918 Eucalyptus grandis
Eucgr.C01815 2.0kb upstream 2.0kb upstream 8612 true Chr03: 28183919-28192530 Eucalyptus grandis
Eucgr.C01815 2.0kb upstream 2.0kb upstream 2000 false Chr03: 28190531-28192530 Eucalyptus grandis
Eucgr.C01815 2.0kb downstream 2.0kb downstream 8612 true Chr03: 28181919-28190530 Eucalyptus grandis
Eucgr.C01815 2.0kb downstream 2.0kb downstream 2000 false Chr03: 28181919-28183918 Eucalyptus grandis
Eucgr.C01815 5.0kb upstream 5.0kb upstream 11612 true Chr03: 28183919-28195530 Eucalyptus grandis
Eucgr.C01815 5.0kb upstream 5.0kb upstream 5000 false Chr03: 28190531-28195530 Eucalyptus grandis
Eucgr.C01815 5.0kb downstream 5.0kb downstream 11612 true Chr03: 28178919-28190530 Eucalyptus grandis
Eucgr.C01815 5.0kb downstream 5.0kb downstream 5000 false Chr03: 28178919-28183918 Eucalyptus grandis
Eucgr.C01815 10.0kb upstream 10.0kb upstream 16612 true Chr03: 28183919-28200530 Eucalyptus grandis
Eucgr.C01815 10.0kb upstream 10.0kb upstream 10000 false Chr03: 28190531-28200530 Eucalyptus grandis
Eucgr.C01815 10.0kb downstream 10.0kb downstream 16612 true Chr03: 28173919-28190530 Eucalyptus grandis
Eucgr.C01815 10.0kb downstream 10.0kb downstream 10000 false Chr03: 28173919-28183918 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063305 5270 Rosid View MSA
123742166 5271 Pentapetalae View MSA
122788030 5272 Eudicot View MSA
122051575 5273 Angiosperm View MSA
121345447 5274 Embryophyte View MSA
123423935 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.4163 0.0 36.3878    
cufflinks 9.11432 0.0 20.2012    
cufflinks 16.6812 0.0 37.0065    
cufflinks 8.11248 0.0 18.0118   Low
cufflinks 8.5432 0.0 18.9567    
cufflinks 17.8778 0.0 39.6713   High

0 Strain