Protein Family : SPOC domain / Transcription elongation factor S-II protein 124063305

Method ID:  5270 Method Name:  Rosid
Sequence Alignment:  View MSA Member Count:  46

46 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
27942.t000005 (1 of 1) PTHR11477:SF17 - PROTEIN PARTNER OF SNF R. communis v0.1 4804   27942: 55741-60544
Cucsa.310590 (1 of 1) PTHR11477:SF17 - PROTEIN PARTNER OF SNF C. sativus v1.0 6440   scaffold02995: 346519-352958
orange1.1g001177m.g (1 of 1) PTHR11477:SF17 - PROTEIN PARTNER OF SNF C. sinensis v1.1 5704   scaffold00005: 195875-201578
AT5G11430 (1 of 3) PTHR11477:SF17 - PROTEIN PARTNER OF SNF A. thaliana TAIR10 4351   Chr5: 3648054-3652404
AT5G25520 (1 of 1) KOG1634 - Predicted transcription factor DATF1, contains PHD and TFS2M domains A. thaliana TAIR10 4533   Chr5: 8885088-8889620
Thhalv10012648m.g (1 of 2) PTHR11477:SF17 - PROTEIN PARTNER OF SNF E. salsugineum v1.0 4576   scaffold_2: 3701542-3706117
Ciclev10007403m.g (1 of 1) PTHR11477:SF17 - PROTEIN PARTNER OF SNF C. clementina v1.0 4418   scaffold_1: 2566453-2570870
Lus10013146.g (1 of 2) PTHR11477:SF17 - PROTEIN PARTNER OF SNF L. usitatissimum v1.0 3641   scaffold359: 222739-226379
Lus10008108.g (1 of 2) PTHR11477:SF17 - PROTEIN PARTNER OF SNF L. usitatissimum v1.0 3623   scaffold524: 159817-163439
Gorai.004G274700 (1 of 2) PTHR11477:SF17 - PROTEIN PARTNER OF SNF G. raimondii v2.1 5435   Chr04: 60886820-60892254
Gorai.009G011500 (1 of 2) PTHR11477:SF17 - PROTEIN PARTNER OF SNF G. raimondii v2.1 5915   Chr09: 948852-954766
Thecc1EG038305 (1 of 1) PTHR11477:SF17 - PROTEIN PARTNER OF SNF T. cacao v1.1 6787   scaffold_9: 8364189-8370975
Araha.10440s0002 (1 of 1) PTHR11477//PTHR11477:SF8 - TRANSCRIPTION ELONGATION FACTOR S-II A. halleri v1.1 3813   Scaffold10440: 6353-10165
Araha.19790s0006 (1 of 1) KOG1634 - Predicted transcription factor DATF1, contains PHD and TFS2M domains A. halleri v1.1 4842   Scaffold19790: 24505-29346
Araha.7834s0001 (1 of 2) PTHR11477:SF17 - PROTEIN PARTNER OF SNF A. halleri v1.1 3773   Scaffold7834: 2394-6166
Cagra.0701s0013 (1 of 1) KOG1634 - Predicted transcription factor DATF1, contains PHD and TFS2M domains C. grandiflora v1.1 4608   Scaffold701: 39117-43724
Cagra.7526s0011 (1 of 2) PTHR11477:SF17 - PROTEIN PARTNER OF SNF C. grandiflora v1.1 3820   Scaffold7526: 51622-55441
Glyma.06G073200 (1 of 2) PTHR11477:SF17 - PROTEIN PARTNER OF SNF G. max Wm82.a2.v1 6814   Chr06: 5644140-5650953
Glyma.04G071900 (1 of 2) PTHR11477:SF17 - PROTEIN PARTNER OF SNF G. max Wm82.a2.v1 5745   Chr04: 5999356-6005100
Brara.F02747 (1 of 3) PTHR11477:SF17 - PROTEIN PARTNER OF SNF B. rapa FPsc v1.3 4564   A06: 22561573-22566136
Brara.D01547 (1 of 3) PTHR11477:SF17 - PROTEIN PARTNER OF SNF B. rapa FPsc v1.3 3402   A04: 13787471-13790872
Brara.J02228 (1 of 3) PTHR11477:SF17 - PROTEIN PARTNER OF SNF B. rapa FPsc v1.3 4446   A10: 16787477-16791922
Bostr.29827s0256 (1 of 1) KOG1634 - Predicted transcription factor DATF1, contains PHD and TFS2M domains B. stricta v1.2 4859   Scaffold29827: 2656435-2661293
Bostr.20055s0095 (1 of 3) PTHR11477:SF17 - PROTEIN PARTNER OF SNF B. stricta v1.2 3882   Scaffold20055: 422384-426265
Bostr.26326s0091 (1 of 3) PTHR11477:SF17 - PROTEIN PARTNER OF SNF B. stricta v1.2 3888   Scaffold26326: 1198921-1202808
Medtr3g108010 (1 of 1) PTHR11477:SF17 - PROTEIN PARTNER OF SNF M. truncatula Mt4.0v1 6240   chr3: 49909087-49915326
SapurV1A.0073s0050 (1 of 1) PTHR11477//PTHR11477:SF17//PTHR11477:SF8 - TRANSCRIPTION ELONGATION FACTOR S-II // PROTEIN PARTNER OF SNF // SUBFAMILY NOT NAMED S. purpurea v1.0 6926   chr18: 3003625-3010550
SapurV1A.0043s0080 (1 of 1) PTHR11477//PTHR11477:SF17 - TRANSCRIPTION ELONGATION FACTOR S-II // PROTEIN PARTNER OF SNF S. purpurea v1.0 4445   chr06: 23545886-23550330
Eucgr.C01815 (1 of 1) PTHR11477:SF17 - PROTEIN PARTNER OF SNF E. grandis v2.0 6612   Chr03: 28183919-28190530
Prupe.7G018800 (1 of 1) PTHR11477:SF17 - PROTEIN PARTNER OF SNF P. persica v2.1 6447   Pp07: 2807404-2813850

46 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
27942.m000158 R. communis v0.1 124063305 SPOC domain / Transcription elongation factor S-II protein 1 5270 Rosid
AT5G11430.1 A. thaliana TAIR10 124063305 SPOC domain / Transcription elongation factor S-II protein 2 5270 Rosid
Thhalv10012648m E. salsugineum v1.0 124063305 SPOC domain / Transcription elongation factor S-II protein 1 5270 Rosid
Lus10013146 L. usitatissimum v1.0 124063305 SPOC domain / Transcription elongation factor S-II protein 2 5270 Rosid
Thecc1EG038305t1 T. cacao v1.1 124063305 SPOC domain / Transcription elongation factor S-II protein 1 5270 Rosid
Glyma.04G071900.1.p G. max Wm82.a2.v1 124063305 SPOC domain / Transcription elongation factor S-II protein 2 5270 Rosid
Glyma.06G073200.1.p G. max Wm82.a2.v1 124063305 SPOC domain / Transcription elongation factor S-II protein 2 5270 Rosid
Brara.D01547.1.p B. rapa FPsc v1.3 124063305 SPOC domain / Transcription elongation factor S-II protein 3 5270 Rosid
Bostr.20055s0095.1.p B. stricta v1.2 124063305 SPOC domain / Transcription elongation factor S-II protein 3 5270 Rosid
Bostr.29827s0256.1.p B. stricta v1.2 124063305 SPOC domain / Transcription elongation factor S-II protein 3 5270 Rosid
SapurV1A.0043s0080.1.p S. purpurea v1.0 124063305 SPOC domain / Transcription elongation factor S-II protein 2 5270 Rosid
Eucgr.C01815.1.p E. grandis v2.0 124063305 SPOC domain / Transcription elongation factor S-II protein 1 5270 Rosid
AL6G22090.t1 A. lyrata v2.1 124063305 SPOC domain / Transcription elongation factor S-II protein 3 5270 Rosid
AL6G37320.t1 A. lyrata v2.1 124063305 SPOC domain / Transcription elongation factor S-II protein 3 5270 Rosid
Podel.18G034900.1.p P. deltoides WV94 v2.1 124063305 SPOC domain / Transcription elongation factor S-II protein 2 5270 Rosid
Podel.06G260300.1.p P. deltoides WV94 v2.1 124063305 SPOC domain / Transcription elongation factor S-II protein 2 5270 Rosid
gene01048-v1.0-hybrid.t1 F. vesca v2.0.a2 124063305 SPOC domain / Transcription elongation factor S-II protein 1 5270 Rosid
Cucsa.310590.1 C. sativus v1.0 124063305 SPOC domain / Transcription elongation factor S-II protein 1 5270 Rosid
orange1.1g001177m C. sinensis v1.1 124063305 SPOC domain / Transcription elongation factor S-II protein 1 5270 Rosid
AT5G25520.2 A. thaliana TAIR10 124063305 SPOC domain / Transcription elongation factor S-II protein 2 5270 Rosid
Ciclev10007403m C. clementina v1.0 124063305 SPOC domain / Transcription elongation factor S-II protein 1 5270 Rosid
Lus10008108 L. usitatissimum v1.0 124063305 SPOC domain / Transcription elongation factor S-II protein 2 5270 Rosid
Gorai.009G011500.1 G. raimondii v2.1 124063305 SPOC domain / Transcription elongation factor S-II protein 2 5270 Rosid
Gorai.004G274700.1 G. raimondii v2.1 124063305 SPOC domain / Transcription elongation factor S-II protein 2 5270 Rosid
Araha.7834s0001.1.p A. halleri v1.1 124063305 SPOC domain / Transcription elongation factor S-II protein 3 5270 Rosid
Araha.10440s0002.1.p A. halleri v1.1 124063305 SPOC domain / Transcription elongation factor S-II protein 3 5270 Rosid
Araha.19790s0006.1.p A. halleri v1.1 124063305 SPOC domain / Transcription elongation factor S-II protein 3 5270 Rosid
Cagra.7526s0011.1.p C. grandiflora v1.1 124063305 SPOC domain / Transcription elongation factor S-II protein 2 5270 Rosid
Cagra.0701s0013.1.p C. grandiflora v1.1 124063305 SPOC domain / Transcription elongation factor S-II protein 2 5270 Rosid
Brara.F02747.1.p B. rapa FPsc v1.3 124063305 SPOC domain / Transcription elongation factor S-II protein 3 5270 Rosid