Gene : SapurV1A.0043s0080 S. purpurea v1.0

Defline:  (1 of 1) PTHR11477//PTHR11477:SF17 - TRANSCRIPTION ELONGATION FACTOR S-II // PROTEIN PARTNER OF SNF Genomic Order:  1953
Name:  ? SapurV1A.0043s0080 Secondary Identifier:  ? PAC:31409219

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0043s0080 0.5kb upstream 0.5kb upstream 4945 true chr06: 23545886-23550830 Salix purpurea
SapurV1A.0043s0080 0.5kb upstream 0.5kb upstream 500 false chr06: 23550331-23550830 Salix purpurea
SapurV1A.0043s0080 0.5kb downstream 0.5kb downstream 4945 true chr06: 23545386-23550330 Salix purpurea
SapurV1A.0043s0080 0.5kb downstream 0.5kb downstream 500 false chr06: 23545386-23545885 Salix purpurea
SapurV1A.0043s0080 1.0kb upstream 1.0kb upstream 5445 true chr06: 23545886-23551330 Salix purpurea
SapurV1A.0043s0080 1.0kb upstream 1.0kb upstream 1000 false chr06: 23550331-23551330 Salix purpurea
SapurV1A.0043s0080 1.0kb downstream 1.0kb downstream 5445 true chr06: 23544886-23550330 Salix purpurea
SapurV1A.0043s0080 1.0kb downstream 1.0kb downstream 1000 false chr06: 23544886-23545885 Salix purpurea
SapurV1A.0043s0080 2.0kb upstream 2.0kb upstream 6445 true chr06: 23545886-23552330 Salix purpurea
SapurV1A.0043s0080 2.0kb upstream 2.0kb upstream 2000 false chr06: 23550331-23552330 Salix purpurea
SapurV1A.0043s0080 2.0kb downstream 2.0kb downstream 6445 true chr06: 23543886-23550330 Salix purpurea
SapurV1A.0043s0080 2.0kb downstream 2.0kb downstream 2000 false chr06: 23543886-23545885 Salix purpurea
SapurV1A.0043s0080 5.0kb upstream 5.0kb upstream 9445 true chr06: 23545886-23555330 Salix purpurea
SapurV1A.0043s0080 5.0kb upstream 5.0kb upstream 5000 false chr06: 23550331-23555330 Salix purpurea
SapurV1A.0043s0080 5.0kb downstream 5.0kb downstream 9445 true chr06: 23540886-23550330 Salix purpurea
SapurV1A.0043s0080 5.0kb downstream 5.0kb downstream 5000 false chr06: 23540886-23545885 Salix purpurea
SapurV1A.0043s0080 10.0kb upstream 10.0kb upstream 14445 true chr06: 23545886-23560330 Salix purpurea
SapurV1A.0043s0080 10.0kb upstream 10.0kb upstream 10000 false chr06: 23550331-23560330 Salix purpurea
SapurV1A.0043s0080 10.0kb downstream 10.0kb downstream 14445 true chr06: 23535886-23550330 Salix purpurea
SapurV1A.0043s0080 10.0kb downstream 10.0kb downstream 10000 false chr06: 23535886-23545885 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453276 5262 Malpighiales View MSA
124240865 5268 Malvidae View MSA
124063305 5270 Rosid View MSA
123742166 5271 Pentapetalae View MSA
122788030 5272 Eudicot View MSA
122051575 5273 Angiosperm View MSA
121345447 5274 Embryophyte View MSA
123423935 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain