Gene : Cagra.7526s0011 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11477:SF17 - PROTEIN PARTNER OF SNF Genomic Order:  11
Name:  ? Cagra.7526s0011 Secondary Identifier:  ? PAC:28911230
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7526s0011 0.5kb upstream 0.5kb upstream 4320 true Scaffold7526: 51622-55941 Capsella grandiflora
Cagra.7526s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold7526: 55442-55941 Capsella grandiflora
Cagra.7526s0011 0.5kb downstream 0.5kb downstream 4320 true Scaffold7526: 51122-55441 Capsella grandiflora
Cagra.7526s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold7526: 51122-51621 Capsella grandiflora
Cagra.7526s0011 1.0kb upstream 1.0kb upstream 4820 true Scaffold7526: 51622-56441 Capsella grandiflora
Cagra.7526s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold7526: 55442-56441 Capsella grandiflora
Cagra.7526s0011 1.0kb downstream 1.0kb downstream 4820 true Scaffold7526: 50622-55441 Capsella grandiflora
Cagra.7526s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold7526: 50622-51621 Capsella grandiflora
Cagra.7526s0011 2.0kb upstream 2.0kb upstream 5820 true Scaffold7526: 51622-57441 Capsella grandiflora
Cagra.7526s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold7526: 55442-57441 Capsella grandiflora
Cagra.7526s0011 2.0kb downstream 2.0kb downstream 5820 true Scaffold7526: 49622-55441 Capsella grandiflora
Cagra.7526s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold7526: 49622-51621 Capsella grandiflora
Cagra.7526s0011 5.0kb upstream 5.0kb upstream 8820 true Scaffold7526: 51622-60441 Capsella grandiflora
Cagra.7526s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold7526: 55442-60441 Capsella grandiflora
Cagra.7526s0011 5.0kb downstream 5.0kb downstream 8820 true Scaffold7526: 46622-55441 Capsella grandiflora
Cagra.7526s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold7526: 46622-51621 Capsella grandiflora
Cagra.7526s0011 10.0kb upstream 10.0kb upstream 13820 true Scaffold7526: 51622-65441 Capsella grandiflora
Cagra.7526s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold7526: 55442-65441 Capsella grandiflora
Cagra.7526s0011 10.0kb downstream 10.0kb downstream 13820 true Scaffold7526: 41622-55441 Capsella grandiflora
Cagra.7526s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold7526: 41622-51621 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362267 5261 Brassicaceae View MSA
123838705 5264 Brassicales-Malvales View MSA
124341937 5266 SBM View MSA
124240865 5268 Malvidae View MSA
124063305 5270 Rosid View MSA
123742166 5271 Pentapetalae View MSA
122788030 5272 Eudicot View MSA
122051575 5273 Angiosperm View MSA
121345447 5274 Embryophyte View MSA
123423935 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain