Protein Family : SPOC domain / Transcription elongation factor S-II protein 124341937

Method ID:  5266 Method Name:  SBM
Sequence Alignment:  View MSA Member Count:  18

18 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
orange1.1g001177m.g (1 of 1) PTHR11477:SF17 - PROTEIN PARTNER OF SNF C. sinensis v1.1 5704   scaffold00005: 195875-201578
AT5G11430 (1 of 3) PTHR11477:SF17 - PROTEIN PARTNER OF SNF A. thaliana TAIR10 4351   Chr5: 3648054-3652404
AT5G25520 (1 of 1) KOG1634 - Predicted transcription factor DATF1, contains PHD and TFS2M domains A. thaliana TAIR10 4533   Chr5: 8885088-8889620
Thhalv10012648m.g (1 of 2) PTHR11477:SF17 - PROTEIN PARTNER OF SNF E. salsugineum v1.0 4576   scaffold_2: 3701542-3706117
Ciclev10007403m.g (1 of 1) PTHR11477:SF17 - PROTEIN PARTNER OF SNF C. clementina v1.0 4418   scaffold_1: 2566453-2570870
Gorai.009G011500 (1 of 2) PTHR11477:SF17 - PROTEIN PARTNER OF SNF G. raimondii v2.1 5915   Chr09: 948852-954766
Thecc1EG038305 (1 of 1) PTHR11477:SF17 - PROTEIN PARTNER OF SNF T. cacao v1.1 6787   scaffold_9: 8364189-8370975
Araha.19790s0006 (1 of 1) KOG1634 - Predicted transcription factor DATF1, contains PHD and TFS2M domains A. halleri v1.1 4842   Scaffold19790: 24505-29346
Araha.7834s0001 (1 of 2) PTHR11477:SF17 - PROTEIN PARTNER OF SNF A. halleri v1.1 3773   Scaffold7834: 2394-6166
Cagra.0701s0013 (1 of 1) KOG1634 - Predicted transcription factor DATF1, contains PHD and TFS2M domains C. grandiflora v1.1 4608   Scaffold701: 39117-43724
Cagra.7526s0011 (1 of 2) PTHR11477:SF17 - PROTEIN PARTNER OF SNF C. grandiflora v1.1 3820   Scaffold7526: 51622-55441
Brara.F02747 (1 of 3) PTHR11477:SF17 - PROTEIN PARTNER OF SNF B. rapa FPsc v1.3 4564   A06: 22561573-22566136
Brara.J02228 (1 of 3) PTHR11477:SF17 - PROTEIN PARTNER OF SNF B. rapa FPsc v1.3 4446   A10: 16787477-16791922
Bostr.29827s0256 (1 of 1) KOG1634 - Predicted transcription factor DATF1, contains PHD and TFS2M domains B. stricta v1.2 4859   Scaffold29827: 2656435-2661293
Bostr.20055s0095 (1 of 3) PTHR11477:SF17 - PROTEIN PARTNER OF SNF B. stricta v1.2 3882   Scaffold20055: 422384-426265
AL6G22090 (1 of 2) PTHR11477:SF17 - PROTEIN PARTNER OF SNF A. lyrata v2.1 4511   scaffold_6: 4564541-4569051
AL6G37320 (1 of 1) KOG1634 - Predicted transcription factor DATF1, contains PHD and TFS2M domains A. lyrata v2.1 4593   scaffold_6: 11450429-11455021
Carub.0006s2338 (1 of 1) PTHR11477:SF17 - PROTEIN PARTNER OF SNF C. rubella v1.1 3933   scaffold_6: 8887638-8891570

18 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
AT5G11430.1 A. thaliana TAIR10 124341937 SPOC domain / Transcription elongation factor S-II protein 2 5266 SBM
Thhalv10012648m E. salsugineum v1.0 124341937 SPOC domain / Transcription elongation factor S-II protein 1 5266 SBM
Thecc1EG038305t1 T. cacao v1.1 124341937 SPOC domain / Transcription elongation factor S-II protein 1 5266 SBM
Cagra.7526s0011.1.p C. grandiflora v1.1 124341937 SPOC domain / Transcription elongation factor S-II protein 2 5266 SBM
Bostr.20055s0095.1.p B. stricta v1.2 124341937 SPOC domain / Transcription elongation factor S-II protein 2 5266 SBM
Bostr.29827s0256.1.p B. stricta v1.2 124341937 SPOC domain / Transcription elongation factor S-II protein 2 5266 SBM
AL6G22090.t1 A. lyrata v2.1 124341937 SPOC domain / Transcription elongation factor S-II protein 2 5266 SBM
AL6G37320.t1 A. lyrata v2.1 124341937 SPOC domain / Transcription elongation factor S-II protein 2 5266 SBM
orange1.1g001177m C. sinensis v1.1 124341937 SPOC domain / Transcription elongation factor S-II protein 1 5266 SBM
AT5G25520.2 A. thaliana TAIR10 124341937 SPOC domain / Transcription elongation factor S-II protein 2 5266 SBM
Ciclev10007403m C. clementina v1.0 124341937 SPOC domain / Transcription elongation factor S-II protein 1 5266 SBM
Gorai.009G011500.1 G. raimondii v2.1 124341937 SPOC domain / Transcription elongation factor S-II protein 1 5266 SBM
Araha.7834s0001.1.p A. halleri v1.1 124341937 SPOC domain / Transcription elongation factor S-II protein 2 5266 SBM
Araha.19790s0006.1.p A. halleri v1.1 124341937 SPOC domain / Transcription elongation factor S-II protein 2 5266 SBM
Cagra.0701s0013.1.p C. grandiflora v1.1 124341937 SPOC domain / Transcription elongation factor S-II protein 2 5266 SBM
Brara.J02228.1.p B. rapa FPsc v1.3 124341937 SPOC domain / Transcription elongation factor S-II protein 2 5266 SBM
Brara.F02747.1.p B. rapa FPsc v1.3 124341937 SPOC domain / Transcription elongation factor S-II protein 2 5266 SBM
Carub.0006s2338.1.p C. rubella v1.1 124341937 SPOC domain / Transcription elongation factor S-II protein 1 5266 SBM