Gene : Thecc1EG038305 T. cacao v1.1
Defline:  (1 of 1) PTHR11477:SF17 - PROTEIN PARTNER OF SNF Genomic Order:  1390
Name:  ? Thecc1EG038305 Secondary Identifier:  ? PAC:27427850
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG038305 0.5kb upstream 0.5kb upstream 7287 true scaffold_9: 8364189-8371475 Theobroma cacao
Thecc1EG038305 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 8370976-8371475 Theobroma cacao
Thecc1EG038305 0.5kb downstream 0.5kb downstream 7287 true scaffold_9: 8363689-8370975 Theobroma cacao
Thecc1EG038305 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 8363689-8364188 Theobroma cacao
Thecc1EG038305 1.0kb upstream 1.0kb upstream 7787 true scaffold_9: 8364189-8371975 Theobroma cacao
Thecc1EG038305 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 8370976-8371975 Theobroma cacao
Thecc1EG038305 1.0kb downstream 1.0kb downstream 7787 true scaffold_9: 8363189-8370975 Theobroma cacao
Thecc1EG038305 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 8363189-8364188 Theobroma cacao
Thecc1EG038305 2.0kb upstream 2.0kb upstream 8787 true scaffold_9: 8364189-8372975 Theobroma cacao
Thecc1EG038305 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 8370976-8372975 Theobroma cacao
Thecc1EG038305 2.0kb downstream 2.0kb downstream 8787 true scaffold_9: 8362189-8370975 Theobroma cacao
Thecc1EG038305 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 8362189-8364188 Theobroma cacao
Thecc1EG038305 5.0kb upstream 5.0kb upstream 11787 true scaffold_9: 8364189-8375975 Theobroma cacao
Thecc1EG038305 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 8370976-8375975 Theobroma cacao
Thecc1EG038305 5.0kb downstream 5.0kb downstream 11787 true scaffold_9: 8359189-8370975 Theobroma cacao
Thecc1EG038305 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 8359189-8364188 Theobroma cacao
Thecc1EG038305 10.0kb upstream 10.0kb upstream 16787 true scaffold_9: 8364189-8380975 Theobroma cacao
Thecc1EG038305 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 8370976-8380975 Theobroma cacao
Thecc1EG038305 10.0kb downstream 10.0kb downstream 16787 true scaffold_9: 8354189-8370975 Theobroma cacao
Thecc1EG038305 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 8354189-8364188 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838705 5264 Brassicales-Malvales View MSA
124341937 5266 SBM View MSA
124240865 5268 Malvidae View MSA
124063305 5270 Rosid View MSA
123742166 5271 Pentapetalae View MSA
122788030 5272 Eudicot View MSA
122051575 5273 Angiosperm View MSA
121345447 5274 Embryophyte View MSA
123423935 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain