Gene : PhHAL.9G332100 P. hallii HAL v2.1

Defline:  (1 of 2) K03040 - DNA-directed RNA polymerase subunit alpha (rpoA) Genomic Order:  2823
Name:  ? PhHAL.9G332100 Secondary Identifier:  ? PAC:40398633

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.9G332100 0.5kb upstream 0.5kb upstream 1832 true Chr09: 38914914-38916745 Panicum hallii HAL
PhHAL.9G332100 0.5kb upstream 0.5kb upstream 500 false Chr09: 38914914-38915413 Panicum hallii HAL
PhHAL.9G332100 0.5kb downstream 0.5kb downstream 1832 true Chr09: 38915414-38917245 Panicum hallii HAL
PhHAL.9G332100 0.5kb downstream 0.5kb downstream 500 false Chr09: 38916746-38917245 Panicum hallii HAL
PhHAL.9G332100 1.0kb upstream 1.0kb upstream 2332 true Chr09: 38914414-38916745 Panicum hallii HAL
PhHAL.9G332100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 38914414-38915413 Panicum hallii HAL
PhHAL.9G332100 1.0kb downstream 1.0kb downstream 2332 true Chr09: 38915414-38917745 Panicum hallii HAL
PhHAL.9G332100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 38916746-38917745 Panicum hallii HAL
PhHAL.9G332100 2.0kb upstream 2.0kb upstream 3332 true Chr09: 38913414-38916745 Panicum hallii HAL
PhHAL.9G332100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 38913414-38915413 Panicum hallii HAL
PhHAL.9G332100 2.0kb downstream 2.0kb downstream 3332 true Chr09: 38915414-38918745 Panicum hallii HAL
PhHAL.9G332100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 38916746-38918745 Panicum hallii HAL
PhHAL.9G332100 5.0kb upstream 5.0kb upstream 6332 true Chr09: 38910414-38916745 Panicum hallii HAL
PhHAL.9G332100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 38910414-38915413 Panicum hallii HAL
PhHAL.9G332100 5.0kb downstream 5.0kb downstream 6332 true Chr09: 38915414-38921745 Panicum hallii HAL
PhHAL.9G332100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 38916746-38921745 Panicum hallii HAL
PhHAL.9G332100 10.0kb upstream 10.0kb upstream 11332 true Chr09: 38905414-38916745 Panicum hallii HAL
PhHAL.9G332100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 38905414-38915413 Panicum hallii HAL
PhHAL.9G332100 10.0kb downstream 10.0kb downstream 11332 true Chr09: 38915414-38926745 Panicum hallii HAL
PhHAL.9G332100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 38916746-38926745 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029214 5273 Angiosperm View MSA
122194257 5267 Panicoideae View MSA
124586225 5269 Grass View MSA
121350838 5274 Embryophyte View MSA
123426853 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier