Gene : Glyma.08G147200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN Genomic Order:  1472
Name:  ? Glyma.08G147200 Secondary Identifier:  ? PAC:30537202
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G147200 0.5kb upstream 0.5kb upstream 2359 true Chr08: 11225087-11227445 Glycine max
Glyma.08G147200 0.5kb upstream 0.5kb upstream 500 false Chr08: 11225087-11225586 Glycine max
Glyma.08G147200 0.5kb downstream 0.5kb downstream 2359 true Chr08: 11225587-11227945 Glycine max
Glyma.08G147200 0.5kb downstream 0.5kb downstream 500 false Chr08: 11227446-11227945 Glycine max
Glyma.08G147200 1.0kb upstream 1.0kb upstream 2859 true Chr08: 11224587-11227445 Glycine max
Glyma.08G147200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 11224587-11225586 Glycine max
Glyma.08G147200 1.0kb downstream 1.0kb downstream 2859 true Chr08: 11225587-11228445 Glycine max
Glyma.08G147200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 11227446-11228445 Glycine max
Glyma.08G147200 2.0kb upstream 2.0kb upstream 3859 true Chr08: 11223587-11227445 Glycine max
Glyma.08G147200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 11223587-11225586 Glycine max
Glyma.08G147200 2.0kb downstream 2.0kb downstream 3859 true Chr08: 11225587-11229445 Glycine max
Glyma.08G147200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 11227446-11229445 Glycine max
Glyma.08G147200 5.0kb upstream 5.0kb upstream 6859 true Chr08: 11220587-11227445 Glycine max
Glyma.08G147200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 11220587-11225586 Glycine max
Glyma.08G147200 5.0kb downstream 5.0kb downstream 6859 true Chr08: 11225587-11232445 Glycine max
Glyma.08G147200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 11227446-11232445 Glycine max
Glyma.08G147200 10.0kb upstream 10.0kb upstream 11859 true Chr08: 11215587-11227445 Glycine max
Glyma.08G147200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 11215587-11225586 Glycine max
Glyma.08G147200 10.0kb downstream 10.0kb downstream 11859 true Chr08: 11225587-11237445 Glycine max
Glyma.08G147200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 11227446-11237445 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312368 5265 Fabidae View MSA
124071729 5270 Rosid View MSA
123744205 5271 Pentapetalae View MSA
122785881 5272 Eudicot View MSA
122041845 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.21584 0.0 17.5121    
cufflinks 7.25664 0.0 20.1818    
cufflinks 13.8356 0.0 37.0925   High
cufflinks 5.37858 0.0 15.4435    
cufflinks 6.79806 0.0 18.9239    
cufflinks 17.2491 0.0 46.0196   High
cufflinks 3.14263 0.0 9.66064   Low
cufflinks 8.69029 0.0 23.8041    
cufflinks 6.41743 0.0 18.0285    
cufflinks 4.491        
cufflinks 5.452        
cufflinks 9.594     High High
cufflinks 5.42        
cufflinks 3.01        
cufflinks 4.391        
cufflinks 3.612        
cufflinks 13.989     High High
cufflinks 3.968        
cufflinks 4.582        
cufflinks 2.474       Low
cufflinks 8.227     High  
cufflinks 3.514        
cufflinks 3.121        
cufflinks 8.718     High High
cufflinks 2.595       Low
cufflinks 10.087     High High

0 Strain