Gene : Glyma.09G255300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12802//PTHR12802:SF48 - SWI/SNF COMPLEX-RELATED Genomic Order:  2553
Name:  ? Glyma.09G255300 Secondary Identifier:  ? PAC:30484600
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G255300 0.5kb upstream 0.5kb upstream 4394 true Chr09: 47469938-47474331 Glycine max
Glyma.09G255300 0.5kb upstream 0.5kb upstream 500 false Chr09: 47469938-47470437 Glycine max
Glyma.09G255300 0.5kb downstream 0.5kb downstream 4394 true Chr09: 47470438-47474831 Glycine max
Glyma.09G255300 0.5kb downstream 0.5kb downstream 500 false Chr09: 47474332-47474831 Glycine max
Glyma.09G255300 1.0kb upstream 1.0kb upstream 4894 true Chr09: 47469438-47474331 Glycine max
Glyma.09G255300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 47469438-47470437 Glycine max
Glyma.09G255300 1.0kb downstream 1.0kb downstream 4894 true Chr09: 47470438-47475331 Glycine max
Glyma.09G255300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 47474332-47475331 Glycine max
Glyma.09G255300 2.0kb upstream 2.0kb upstream 5894 true Chr09: 47468438-47474331 Glycine max
Glyma.09G255300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 47468438-47470437 Glycine max
Glyma.09G255300 2.0kb downstream 2.0kb downstream 5894 true Chr09: 47470438-47476331 Glycine max
Glyma.09G255300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 47474332-47476331 Glycine max
Glyma.09G255300 5.0kb upstream 5.0kb upstream 8894 true Chr09: 47465438-47474331 Glycine max
Glyma.09G255300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 47465438-47470437 Glycine max
Glyma.09G255300 5.0kb downstream 5.0kb downstream 8894 true Chr09: 47470438-47479331 Glycine max
Glyma.09G255300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 47474332-47479331 Glycine max
Glyma.09G255300 10.0kb upstream 10.0kb upstream 13894 true Chr09: 47460438-47474331 Glycine max
Glyma.09G255300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 47460438-47470437 Glycine max
Glyma.09G255300 10.0kb downstream 10.0kb downstream 13894 true Chr09: 47470438-47484331 Glycine max
Glyma.09G255300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 47474332-47484331 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122243077 5265 Fabidae Singleton cluster - no MSA
124041932 5270 Rosid View MSA
123747099 5271 Pentapetalae View MSA
122797418 5272 Eudicot View MSA
122043190 5273 Angiosperm View MSA
121350765 5274 Embryophyte View MSA
123427162 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.537858 0.0 2.06871    
cufflinks 0.599717 0.0 2.29318    
cufflinks 0.936623 0.0 3.50764    
cufflinks 0.685403 0.0 2.60503    
cufflinks 0.421633 0.0 1.63772    
cufflinks 0.117428 0.0 0.480106 Low Low
cufflinks 0.165766 0.0 0.667119 Low Low
cufflinks 0.41828 0.0 1.62315    
cufflinks 1.06869 0.0 3.97965   High
cufflinks 0.122        
cufflinks 0.073        
cufflinks 0.681       High
cufflinks 0.172        
cufflinks 0.145        
cufflinks 0.135        
cufflinks 0.157        
cufflinks 0.027     Low Low
cufflinks 0.41       High
cufflinks 0.374       High
cufflinks 0.212        
cufflinks 0.083        
cufflinks 0.303        
cufflinks 0.301        
cufflinks 0.09        
cufflinks 0.273        
cufflinks 0.064     Low Low

0 Strain