Gene : Glyma.10G142600 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR12565:SF178 - TRANSCRIPTION FACTOR PIF3 Genomic Order:  1426
Name:  ? Glyma.10G142600 Secondary Identifier:  ? PAC:30476777
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G142600 0.5kb upstream 0.5kb upstream 5439 true Chr10: 37701391-37706829 Glycine max
Glyma.10G142600 0.5kb upstream 0.5kb upstream 500 false Chr10: 37706330-37706829 Glycine max
Glyma.10G142600 0.5kb downstream 0.5kb downstream 5439 true Chr10: 37700891-37706329 Glycine max
Glyma.10G142600 0.5kb downstream 0.5kb downstream 500 false Chr10: 37700891-37701390 Glycine max
Glyma.10G142600 1.0kb upstream 1.0kb upstream 5939 true Chr10: 37701391-37707329 Glycine max
Glyma.10G142600 1.0kb upstream 1.0kb upstream 1000 false Chr10: 37706330-37707329 Glycine max
Glyma.10G142600 1.0kb downstream 1.0kb downstream 5939 true Chr10: 37700391-37706329 Glycine max
Glyma.10G142600 1.0kb downstream 1.0kb downstream 1000 false Chr10: 37700391-37701390 Glycine max
Glyma.10G142600 2.0kb upstream 2.0kb upstream 6939 true Chr10: 37701391-37708329 Glycine max
Glyma.10G142600 2.0kb upstream 2.0kb upstream 2000 false Chr10: 37706330-37708329 Glycine max
Glyma.10G142600 2.0kb downstream 2.0kb downstream 6939 true Chr10: 37699391-37706329 Glycine max
Glyma.10G142600 2.0kb downstream 2.0kb downstream 2000 false Chr10: 37699391-37701390 Glycine max
Glyma.10G142600 5.0kb upstream 5.0kb upstream 9939 true Chr10: 37701391-37711329 Glycine max
Glyma.10G142600 5.0kb upstream 5.0kb upstream 5000 false Chr10: 37706330-37711329 Glycine max
Glyma.10G142600 5.0kb downstream 5.0kb downstream 9939 true Chr10: 37696391-37706329 Glycine max
Glyma.10G142600 5.0kb downstream 5.0kb downstream 5000 false Chr10: 37696391-37701390 Glycine max
Glyma.10G142600 10.0kb upstream 10.0kb upstream 14939 true Chr10: 37701391-37716329 Glycine max
Glyma.10G142600 10.0kb upstream 10.0kb upstream 10000 false Chr10: 37706330-37716329 Glycine max
Glyma.10G142600 10.0kb downstream 10.0kb downstream 14939 true Chr10: 37691391-37706329 Glycine max
Glyma.10G142600 10.0kb downstream 10.0kb downstream 10000 false Chr10: 37691391-37701390 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300539 5265 Fabidae View MSA
124069526 5270 Rosid View MSA
123737897 5271 Pentapetalae View MSA
122794460 5272 Eudicot View MSA
122048181 5273 Angiosperm View MSA
121348763 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.778823 0.0 3.05403   Low
cufflinks 2.54629 0.0 10.6529    
cufflinks 6.34782 0.0 22.0545    
cufflinks 2.55478 0.0 10.653    
cufflinks 15.5145 0.0 63.421   High
cufflinks 3.0338 0.0 10.2968    
cufflinks 2.37551 0.0 8.7815    
cufflinks 3.96978 0.0 14.7825    
cufflinks 0.608733 0.0 3.39692   Low
cufflinks 0.992        
cufflinks 0.102        
cufflinks 1.295       High
cufflinks 0.399        
cufflinks 0.633        
cufflinks 0.017     Low Low
cufflinks 0.757        
cufflinks 0.074        
cufflinks 0.861        
cufflinks 0.352        
cufflinks 0.515        
cufflinks 0.069       Low
cufflinks 0.58        
cufflinks 0.427        
cufflinks 0.027     Low Low
cufflinks 0.696        
cufflinks 0.135        

0 Strain