Gene : Glyma.10G236100 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG0978//KOG4593//KOG4677 - E3 ubiquitin ligase involved in syntaxin degradation // Mitotic checkpoint protein MAD1 // Golgi integral membrane protein Genomic Order:  2361
Name:  ? Glyma.10G236100 Secondary Identifier:  ? PAC:30475422
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G236100 0.5kb upstream 0.5kb upstream 7963 true Chr10: 46503152-46511114 Glycine max
Glyma.10G236100 0.5kb upstream 0.5kb upstream 500 false Chr10: 46510615-46511114 Glycine max
Glyma.10G236100 0.5kb downstream 0.5kb downstream 7963 true Chr10: 46502652-46510614 Glycine max
Glyma.10G236100 0.5kb downstream 0.5kb downstream 500 false Chr10: 46502652-46503151 Glycine max
Glyma.10G236100 1.0kb upstream 1.0kb upstream 8463 true Chr10: 46503152-46511614 Glycine max
Glyma.10G236100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 46510615-46511614 Glycine max
Glyma.10G236100 1.0kb downstream 1.0kb downstream 8463 true Chr10: 46502152-46510614 Glycine max
Glyma.10G236100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 46502152-46503151 Glycine max
Glyma.10G236100 2.0kb upstream 2.0kb upstream 9463 true Chr10: 46503152-46512614 Glycine max
Glyma.10G236100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 46510615-46512614 Glycine max
Glyma.10G236100 2.0kb downstream 2.0kb downstream 9463 true Chr10: 46501152-46510614 Glycine max
Glyma.10G236100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 46501152-46503151 Glycine max
Glyma.10G236100 5.0kb upstream 5.0kb upstream 12463 true Chr10: 46503152-46515614 Glycine max
Glyma.10G236100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 46510615-46515614 Glycine max
Glyma.10G236100 5.0kb downstream 5.0kb downstream 12463 true Chr10: 46498152-46510614 Glycine max
Glyma.10G236100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 46498152-46503151 Glycine max
Glyma.10G236100 10.0kb upstream 10.0kb upstream 17463 true Chr10: 46503152-46520614 Glycine max
Glyma.10G236100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 46510615-46520614 Glycine max
Glyma.10G236100 10.0kb downstream 10.0kb downstream 17463 true Chr10: 46493152-46510614 Glycine max
Glyma.10G236100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 46493152-46503151 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040955 5273 Angiosperm View MSA
122306200 5265 Fabidae View MSA
124073643 5270 Rosid View MSA
123747619 5271 Pentapetalae View MSA
122785648 5272 Eudicot View MSA
121348283 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.02608 0.0 7.21742    
cufflinks 1.88942 0.0 6.77892    
cufflinks 1.96339 0.0 6.896    
cufflinks 2.73416 0.0 10.415    
cufflinks 5.42554 0.0 18.7573   High
cufflinks 2.77102 0.0 10.7031    
cufflinks 1.36507 0.0 6.43465   Low
cufflinks 3.86636 0.0 13.9952    
cufflinks 5.61428 0.0 19.9468   High
cufflinks 1.632        
cufflinks 0.953        
cufflinks 1.051        
cufflinks 2.746       High
cufflinks 2.472       High
cufflinks 1.261        
cufflinks 1.893        
cufflinks 0.351       Low
cufflinks 2.277        
cufflinks 0.724       Low
cufflinks 2.343       High
cufflinks 0.751       Low
cufflinks 1.744        
cufflinks 1.268        
cufflinks 0.756       Low
cufflinks 2.019        
cufflinks 1.424        

0 Strain