Gene : Glyma.10G239100 G. max Wm82.a2.v1
Defline:  (1 of 14) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) Genomic Order:  2391
Name:  ? Glyma.10G239100 Secondary Identifier:  ? PAC:30473989
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G239100 0.5kb upstream 0.5kb upstream 4776 true Chr10: 46771981-46776756 Glycine max
Glyma.10G239100 0.5kb upstream 0.5kb upstream 500 false Chr10: 46776257-46776756 Glycine max
Glyma.10G239100 0.5kb downstream 0.5kb downstream 4776 true Chr10: 46771481-46776256 Glycine max
Glyma.10G239100 0.5kb downstream 0.5kb downstream 500 false Chr10: 46771481-46771980 Glycine max
Glyma.10G239100 1.0kb upstream 1.0kb upstream 5276 true Chr10: 46771981-46777256 Glycine max
Glyma.10G239100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 46776257-46777256 Glycine max
Glyma.10G239100 1.0kb downstream 1.0kb downstream 5276 true Chr10: 46770981-46776256 Glycine max
Glyma.10G239100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 46770981-46771980 Glycine max
Glyma.10G239100 2.0kb upstream 2.0kb upstream 6276 true Chr10: 46771981-46778256 Glycine max
Glyma.10G239100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 46776257-46778256 Glycine max
Glyma.10G239100 2.0kb downstream 2.0kb downstream 6276 true Chr10: 46769981-46776256 Glycine max
Glyma.10G239100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 46769981-46771980 Glycine max
Glyma.10G239100 5.0kb upstream 5.0kb upstream 9276 true Chr10: 46771981-46781256 Glycine max
Glyma.10G239100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 46776257-46781256 Glycine max
Glyma.10G239100 5.0kb downstream 5.0kb downstream 9276 true Chr10: 46766981-46776256 Glycine max
Glyma.10G239100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 46766981-46771980 Glycine max
Glyma.10G239100 10.0kb upstream 10.0kb upstream 14276 true Chr10: 46771981-46786256 Glycine max
Glyma.10G239100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 46776257-46786256 Glycine max
Glyma.10G239100 10.0kb downstream 10.0kb downstream 14276 true Chr10: 46761981-46776256 Glycine max
Glyma.10G239100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 46761981-46771980 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309113 5265 Fabidae View MSA
124069321 5270 Rosid View MSA
123751972 5271 Pentapetalae View MSA
122797642 5272 Eudicot View MSA
122042700 5273 Angiosperm View MSA
121346873 5274 Embryophyte View MSA
123428073 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.3805 0.0 156.25 High High
cufflinks 30.0733 0.0 116.299 High  
cufflinks 29.5971 0.0 114.833 High  
cufflinks 21.6909 0.0 81.6823 High Low
cufflinks 31.9685 0.0 124.981 High  
cufflinks 21.3596 0.0 80.7024   Low
cufflinks 36.6034 0.0 146.144 High High
cufflinks 33.1014 0.0 129.991 High  
cufflinks 24.4897 0.0 92.7817 High  
cufflinks 5.161       Low
cufflinks 8.217     High  
cufflinks 4.248       Low
cufflinks 4.83       Low
cufflinks 5.91        
cufflinks 7.967     High  
cufflinks 8.969     High  
cufflinks 7.719     High  
cufflinks 4.311       Low
cufflinks 6.405        
cufflinks 11.717     High High
cufflinks 10.379     High High
cufflinks 10.793     High High
cufflinks 8.244     High  
cufflinks 7.767     High  
cufflinks 10.016     High High
cufflinks 6.275        

0 Strain