Gene : Glyma.10G262600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Genomic Order:  2626
Name:  ? Glyma.10G262600 Secondary Identifier:  ? PAC:30475419
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G262600 0.5kb upstream 0.5kb upstream 1760 true Chr10: 48731315-48733074 Glycine max
Glyma.10G262600 0.5kb upstream 0.5kb upstream 500 false Chr10: 48732575-48733074 Glycine max
Glyma.10G262600 0.5kb downstream 0.5kb downstream 1760 true Chr10: 48730815-48732574 Glycine max
Glyma.10G262600 0.5kb downstream 0.5kb downstream 500 false Chr10: 48730815-48731314 Glycine max
Glyma.10G262600 1.0kb upstream 1.0kb upstream 2260 true Chr10: 48731315-48733574 Glycine max
Glyma.10G262600 1.0kb upstream 1.0kb upstream 1000 false Chr10: 48732575-48733574 Glycine max
Glyma.10G262600 1.0kb downstream 1.0kb downstream 2260 true Chr10: 48730315-48732574 Glycine max
Glyma.10G262600 1.0kb downstream 1.0kb downstream 1000 false Chr10: 48730315-48731314 Glycine max
Glyma.10G262600 2.0kb upstream 2.0kb upstream 3260 true Chr10: 48731315-48734574 Glycine max
Glyma.10G262600 2.0kb upstream 2.0kb upstream 2000 false Chr10: 48732575-48734574 Glycine max
Glyma.10G262600 2.0kb downstream 2.0kb downstream 3260 true Chr10: 48729315-48732574 Glycine max
Glyma.10G262600 2.0kb downstream 2.0kb downstream 2000 false Chr10: 48729315-48731314 Glycine max
Glyma.10G262600 5.0kb upstream 5.0kb upstream 6260 true Chr10: 48731315-48737574 Glycine max
Glyma.10G262600 5.0kb upstream 5.0kb upstream 5000 false Chr10: 48732575-48737574 Glycine max
Glyma.10G262600 5.0kb downstream 5.0kb downstream 6260 true Chr10: 48726315-48732574 Glycine max
Glyma.10G262600 5.0kb downstream 5.0kb downstream 5000 false Chr10: 48726315-48731314 Glycine max
Glyma.10G262600 10.0kb upstream 10.0kb upstream 11260 true Chr10: 48731315-48742574 Glycine max
Glyma.10G262600 10.0kb upstream 10.0kb upstream 10000 false Chr10: 48732575-48742574 Glycine max
Glyma.10G262600 10.0kb downstream 10.0kb downstream 11260 true Chr10: 48721315-48732574 Glycine max
Glyma.10G262600 10.0kb downstream 10.0kb downstream 10000 false Chr10: 48721315-48731314 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314147 5265 Fabidae View MSA
124068371 5270 Rosid View MSA
123752134 5271 Pentapetalae View MSA
122795209 5272 Eudicot View MSA
122048631 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.31922 0.0 13.3507   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.26407 0.0 1.02025    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0144727 0.0 0.0664523 Low Low
cufflinks 0.297383 0.0 1.14244    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.426        
cufflinks 5.136        
cufflinks 1.992        
cufflinks 0.254        
cufflinks 0.034     Low Low
cufflinks 6.36     High High
cufflinks 2.169        
cufflinks 9.449     High High
cufflinks 1.41        
cufflinks 0.036     Low Low
cufflinks 1.253        
cufflinks 4.363        
cufflinks 0.641        
cufflinks 0.358        
cufflinks 4.59        
cufflinks 0.133       Low
cufflinks 2.25        

0 Strain