Gene : Glyma.10G255700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11864//PTHR11864:SF21 - PRE-MRNA-PROCESSING PROTEIN PRP40 Genomic Order:  2557
Name:  ? Glyma.10G255700 Secondary Identifier:  ? PAC:30475847
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G255700 0.5kb upstream 0.5kb upstream 24029 true Chr10: 48249230-48273258 Glycine max
Glyma.10G255700 0.5kb upstream 0.5kb upstream 500 false Chr10: 48249230-48249729 Glycine max
Glyma.10G255700 0.5kb downstream 0.5kb downstream 24029 true Chr10: 48249730-48273758 Glycine max
Glyma.10G255700 0.5kb downstream 0.5kb downstream 500 false Chr10: 48273259-48273758 Glycine max
Glyma.10G255700 1.0kb upstream 1.0kb upstream 24529 true Chr10: 48248730-48273258 Glycine max
Glyma.10G255700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 48248730-48249729 Glycine max
Glyma.10G255700 1.0kb downstream 1.0kb downstream 24529 true Chr10: 48249730-48274258 Glycine max
Glyma.10G255700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 48273259-48274258 Glycine max
Glyma.10G255700 2.0kb upstream 2.0kb upstream 25529 true Chr10: 48247730-48273258 Glycine max
Glyma.10G255700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 48247730-48249729 Glycine max
Glyma.10G255700 2.0kb downstream 2.0kb downstream 25529 true Chr10: 48249730-48275258 Glycine max
Glyma.10G255700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 48273259-48275258 Glycine max
Glyma.10G255700 5.0kb upstream 5.0kb upstream 28529 true Chr10: 48244730-48273258 Glycine max
Glyma.10G255700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 48244730-48249729 Glycine max
Glyma.10G255700 5.0kb downstream 5.0kb downstream 28529 true Chr10: 48249730-48278258 Glycine max
Glyma.10G255700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 48273259-48278258 Glycine max
Glyma.10G255700 10.0kb upstream 10.0kb upstream 33529 true Chr10: 48239730-48273258 Glycine max
Glyma.10G255700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 48239730-48249729 Glycine max
Glyma.10G255700 10.0kb downstream 10.0kb downstream 33529 true Chr10: 48249730-48283258 Glycine max
Glyma.10G255700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 48273259-48283258 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306677 5265 Fabidae View MSA
124060501 5270 Rosid View MSA
123741058 5271 Pentapetalae View MSA
122797131 5272 Eudicot View MSA
122049454 5273 Angiosperm View MSA
121347556 5274 Embryophyte View MSA
123423988 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.43853 0.0 19.0017    
cufflinks 5.66171 0.0 19.7125    
cufflinks 4.30828 0.0 17.2534    
cufflinks 4.836 0.0 17.7187    
cufflinks 4.51091 0.0 14.3602    
cufflinks 3.10601 0.0 11.6515   Low
cufflinks 6.84976 0.0 20.9631   High
cufflinks 3.85591 0.0 13.6936    
cufflinks 3.30716 0.0 12.8522   Low
cufflinks 0.234        
cufflinks 0.138       Low
cufflinks 0.313        
cufflinks 0.285        
cufflinks 0.317        
cufflinks 0.284        
cufflinks 0.411        
cufflinks 0.147       Low
cufflinks 0.413        
cufflinks 0.409        
cufflinks 0.467       High
cufflinks 0.204        
cufflinks 0.427        
cufflinks 0.383        
cufflinks 0.172       Low
cufflinks 0.431       High
cufflinks 0.221        

0 Strain