Gene : Glyma.11G000300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10625//PTHR10625:SF127 - HISTONE DEACETYLASE Genomic Order:  3
Name:  ? Glyma.11G000300 Secondary Identifier:  ? PAC:30531577
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G000300 0.5kb upstream 0.5kb upstream 10476 true Chr11: 14155-24630 Glycine max
Glyma.11G000300 0.5kb upstream 0.5kb upstream 500 false Chr11: 24131-24630 Glycine max
Glyma.11G000300 0.5kb downstream 0.5kb downstream 10476 true Chr11: 13655-24130 Glycine max
Glyma.11G000300 0.5kb downstream 0.5kb downstream 500 false Chr11: 13655-14154 Glycine max
Glyma.11G000300 1.0kb upstream 1.0kb upstream 10976 true Chr11: 14155-25130 Glycine max
Glyma.11G000300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 24131-25130 Glycine max
Glyma.11G000300 1.0kb downstream 1.0kb downstream 10976 true Chr11: 13155-24130 Glycine max
Glyma.11G000300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 13155-14154 Glycine max
Glyma.11G000300 2.0kb upstream 2.0kb upstream 11976 true Chr11: 14155-26130 Glycine max
Glyma.11G000300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 24131-26130 Glycine max
Glyma.11G000300 2.0kb downstream 2.0kb downstream 11976 true Chr11: 12155-24130 Glycine max
Glyma.11G000300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 12155-14154 Glycine max
Glyma.11G000300 5.0kb upstream 5.0kb upstream 14976 true Chr11: 14155-29130 Glycine max
Glyma.11G000300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 24131-29130 Glycine max
Glyma.11G000300 5.0kb downstream 5.0kb downstream 14976 true Chr11: 9155-24130 Glycine max
Glyma.11G000300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 9155-14154 Glycine max
Glyma.11G000300 10.0kb upstream 10.0kb upstream 19976 true Chr11: 14155-34130 Glycine max
Glyma.11G000300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 24131-34130 Glycine max
Glyma.11G000300 10.0kb downstream 10.0kb downstream 19976 true Chr11: 4155-24130 Glycine max
Glyma.11G000300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4155-14154 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297167 5265 Fabidae View MSA
124035929 5270 Rosid View MSA
123742951 5271 Pentapetalae View MSA
122788730 5272 Eudicot View MSA
122042529 5273 Angiosperm View MSA
123429001 5275 Viridiplantae View MSA
121349926 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.6437 0.0 31.5526    
cufflinks 12.9264 0.0 38.7507    
cufflinks 6.24138 0.0 19.0275   Low
cufflinks 7.95555 0.0 23.9533    
cufflinks 15.0033 0.0 45.2336   High
cufflinks 10.9496 0.0 32.5275    
cufflinks 11.5637 0.0 34.2514    
cufflinks 9.95625 0.0 29.7365    
cufflinks 7.61954 0.0 23.0482    
cufflinks 5.12        
cufflinks 1.581       Low
cufflinks 3.613        
cufflinks 7.363     High  
cufflinks 8.523     High High
cufflinks 1.13       Low
cufflinks 6.241        
cufflinks 3.669        
cufflinks 4.668        
cufflinks 7.454     High  
cufflinks 6.064        
cufflinks 2.155       Low
cufflinks 6.091        
cufflinks 6.657        
cufflinks 1.762       Low
cufflinks 6.187        
cufflinks 3.029        

0 Strain