Gene : Glyma.11G102600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR15377 - TRANSCRIPTION FACTOR CA150B RELATED - TCERG1 Genomic Order:  1026
Name:  ? Glyma.11G102600 Secondary Identifier:  ? PAC:30527677
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G102600 0.5kb upstream 0.5kb upstream 12644 true Chr11: 7788135-7800778 Glycine max
Glyma.11G102600 0.5kb upstream 0.5kb upstream 500 false Chr11: 7788135-7788634 Glycine max
Glyma.11G102600 0.5kb downstream 0.5kb downstream 12644 true Chr11: 7788635-7801278 Glycine max
Glyma.11G102600 0.5kb downstream 0.5kb downstream 500 false Chr11: 7800779-7801278 Glycine max
Glyma.11G102600 1.0kb upstream 1.0kb upstream 13144 true Chr11: 7787635-7800778 Glycine max
Glyma.11G102600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 7787635-7788634 Glycine max
Glyma.11G102600 1.0kb downstream 1.0kb downstream 13144 true Chr11: 7788635-7801778 Glycine max
Glyma.11G102600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 7800779-7801778 Glycine max
Glyma.11G102600 2.0kb upstream 2.0kb upstream 14144 true Chr11: 7786635-7800778 Glycine max
Glyma.11G102600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 7786635-7788634 Glycine max
Glyma.11G102600 2.0kb downstream 2.0kb downstream 14144 true Chr11: 7788635-7802778 Glycine max
Glyma.11G102600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 7800779-7802778 Glycine max
Glyma.11G102600 5.0kb upstream 5.0kb upstream 17144 true Chr11: 7783635-7800778 Glycine max
Glyma.11G102600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 7783635-7788634 Glycine max
Glyma.11G102600 5.0kb downstream 5.0kb downstream 17144 true Chr11: 7788635-7805778 Glycine max
Glyma.11G102600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 7800779-7805778 Glycine max
Glyma.11G102600 10.0kb upstream 10.0kb upstream 22144 true Chr11: 7778635-7800778 Glycine max
Glyma.11G102600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 7778635-7788634 Glycine max
Glyma.11G102600 10.0kb downstream 10.0kb downstream 22144 true Chr11: 7788635-7810778 Glycine max
Glyma.11G102600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 7800779-7810778 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304823 5265 Fabidae View MSA
124068165 5270 Rosid View MSA
123739157 5271 Pentapetalae View MSA
122793255 5272 Eudicot View MSA
122049454 5273 Angiosperm View MSA
121347556 5274 Embryophyte View MSA
123423988 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.53913 0.0 26.3518   High
cufflinks 5.68511 0.0 20.6684    
cufflinks 6.66572 0.0 23.706    
cufflinks 6.28255 0.0 22.2585    
cufflinks 5.56607 0.0 20.1071    
cufflinks 2.63134 0.0 10.829   Low
cufflinks 6.58784 0.0 23.1781    
cufflinks 5.35915 0.0 19.2305    
cufflinks 4.75246 0.0 17.2893    
cufflinks 0.214        
cufflinks 0.129       Low
cufflinks 0.286        
cufflinks 0.258        
cufflinks 0.292        
cufflinks 0.274        
cufflinks 0.369        
cufflinks 0.182        
cufflinks 0.34        
cufflinks 0.381        
cufflinks 0.416       High
cufflinks 0.135       Low
cufflinks 0.39       High
cufflinks 0.343        
cufflinks 0.109       Low
cufflinks 0.362        
cufflinks 0.199        

0 Strain