Gene : Glyma.12G028100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR15377 - TRANSCRIPTION FACTOR CA150B RELATED - TCERG1 Genomic Order:  281
Name:  ? Glyma.12G028100 Secondary Identifier:  ? PAC:30545515
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G028100 0.5kb upstream 0.5kb upstream 14767 true Chr12: 2085462-2100228 Glycine max
Glyma.12G028100 0.5kb upstream 0.5kb upstream 500 false Chr12: 2099729-2100228 Glycine max
Glyma.12G028100 0.5kb downstream 0.5kb downstream 14767 true Chr12: 2084962-2099728 Glycine max
Glyma.12G028100 0.5kb downstream 0.5kb downstream 500 false Chr12: 2084962-2085461 Glycine max
Glyma.12G028100 1.0kb upstream 1.0kb upstream 15267 true Chr12: 2085462-2100728 Glycine max
Glyma.12G028100 1.0kb upstream 1.0kb upstream 1000 false Chr12: 2099729-2100728 Glycine max
Glyma.12G028100 1.0kb downstream 1.0kb downstream 15267 true Chr12: 2084462-2099728 Glycine max
Glyma.12G028100 1.0kb downstream 1.0kb downstream 1000 false Chr12: 2084462-2085461 Glycine max
Glyma.12G028100 2.0kb upstream 2.0kb upstream 16267 true Chr12: 2085462-2101728 Glycine max
Glyma.12G028100 2.0kb upstream 2.0kb upstream 2000 false Chr12: 2099729-2101728 Glycine max
Glyma.12G028100 2.0kb downstream 2.0kb downstream 16267 true Chr12: 2083462-2099728 Glycine max
Glyma.12G028100 2.0kb downstream 2.0kb downstream 2000 false Chr12: 2083462-2085461 Glycine max
Glyma.12G028100 5.0kb upstream 5.0kb upstream 19267 true Chr12: 2085462-2104728 Glycine max
Glyma.12G028100 5.0kb upstream 5.0kb upstream 5000 false Chr12: 2099729-2104728 Glycine max
Glyma.12G028100 5.0kb downstream 5.0kb downstream 19267 true Chr12: 2080462-2099728 Glycine max
Glyma.12G028100 5.0kb downstream 5.0kb downstream 5000 false Chr12: 2080462-2085461 Glycine max
Glyma.12G028100 10.0kb upstream 10.0kb upstream 24267 true Chr12: 2085462-2109728 Glycine max
Glyma.12G028100 10.0kb upstream 10.0kb upstream 10000 false Chr12: 2099729-2109728 Glycine max
Glyma.12G028100 10.0kb downstream 10.0kb downstream 24267 true Chr12: 2075462-2099728 Glycine max
Glyma.12G028100 10.0kb downstream 10.0kb downstream 10000 false Chr12: 2075462-2085461 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304823 5265 Fabidae View MSA
124068165 5270 Rosid View MSA
123739157 5271 Pentapetalae View MSA
122793255 5272 Eudicot View MSA
122049454 5273 Angiosperm View MSA
121347556 5274 Embryophyte View MSA
123423988 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.22418 0.0 21.953   High
cufflinks 5.39175 0.0 14.5887    
cufflinks 7.90074 0.0 21.0934   High
cufflinks 5.99748 0.0 16.1311    
cufflinks 5.88017 0.0 15.8346    
cufflinks 2.58267 0.0 7.45482   Low
cufflinks 6.41194 0.0 17.2175    
cufflinks 4.55184 0.0 12.4311    
cufflinks 4.88729 0.0 13.2884    
cufflinks 1.039       Low
cufflinks 1.48        
cufflinks 1.666        
cufflinks 1.368        
cufflinks 1.611        
cufflinks 1.978        
cufflinks 2.282       High
cufflinks 1.09       Low
cufflinks 1.669        
cufflinks 1.833        
cufflinks 2.394       High
cufflinks 1.65        
cufflinks 2.401       High
cufflinks 1.895        
cufflinks 1.39        
cufflinks 2.331       High
cufflinks 1.523        

0 Strain