Gene : Glyma.12G074800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31057:SF0 - E3 UFM1-PROTEIN LIGASE 1 Genomic Order:  748
Name:  ? Glyma.12G074800 Secondary Identifier:  ? PAC:30548787
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G074800 0.5kb upstream 0.5kb upstream 8888 true Chr12: 5646423-5655310 Glycine max
Glyma.12G074800 0.5kb upstream 0.5kb upstream 500 false Chr12: 5654811-5655310 Glycine max
Glyma.12G074800 0.5kb downstream 0.5kb downstream 8888 true Chr12: 5645923-5654810 Glycine max
Glyma.12G074800 0.5kb downstream 0.5kb downstream 500 false Chr12: 5645923-5646422 Glycine max
Glyma.12G074800 1.0kb upstream 1.0kb upstream 9388 true Chr12: 5646423-5655810 Glycine max
Glyma.12G074800 1.0kb upstream 1.0kb upstream 1000 false Chr12: 5654811-5655810 Glycine max
Glyma.12G074800 1.0kb downstream 1.0kb downstream 9388 true Chr12: 5645423-5654810 Glycine max
Glyma.12G074800 1.0kb downstream 1.0kb downstream 1000 false Chr12: 5645423-5646422 Glycine max
Glyma.12G074800 2.0kb upstream 2.0kb upstream 10388 true Chr12: 5646423-5656810 Glycine max
Glyma.12G074800 2.0kb upstream 2.0kb upstream 2000 false Chr12: 5654811-5656810 Glycine max
Glyma.12G074800 2.0kb downstream 2.0kb downstream 10388 true Chr12: 5644423-5654810 Glycine max
Glyma.12G074800 2.0kb downstream 2.0kb downstream 2000 false Chr12: 5644423-5646422 Glycine max
Glyma.12G074800 5.0kb upstream 5.0kb upstream 13388 true Chr12: 5646423-5659810 Glycine max
Glyma.12G074800 5.0kb upstream 5.0kb upstream 5000 false Chr12: 5654811-5659810 Glycine max
Glyma.12G074800 5.0kb downstream 5.0kb downstream 13388 true Chr12: 5641423-5654810 Glycine max
Glyma.12G074800 5.0kb downstream 5.0kb downstream 5000 false Chr12: 5641423-5646422 Glycine max
Glyma.12G074800 10.0kb upstream 10.0kb upstream 18388 true Chr12: 5646423-5664810 Glycine max
Glyma.12G074800 10.0kb upstream 10.0kb upstream 10000 false Chr12: 5654811-5664810 Glycine max
Glyma.12G074800 10.0kb downstream 10.0kb downstream 18388 true Chr12: 5636423-5654810 Glycine max
Glyma.12G074800 10.0kb downstream 10.0kb downstream 10000 false Chr12: 5636423-5646422 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026361 5273 Angiosperm View MSA
122300427 5265 Fabidae View MSA
124064976 5270 Rosid View MSA
123747410 5271 Pentapetalae View MSA
122787420 5272 Eudicot View MSA
121346113 5274 Embryophyte View MSA
123424330 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.77662 0.0 23.4122    
cufflinks 4.61947 0.0 19.6251   Low
cufflinks 6.5869 0.0 27.0363    
cufflinks 6.58497 0.0 22.8477    
cufflinks 5.47068 0.0 22.5643    
cufflinks 6.55943 0.0 22.8687    
cufflinks 8.33439 0.0 33.1537   High
cufflinks 4.04098 0.0 17.3063   Low
cufflinks 7.03532 0.0 28.31    
cufflinks 0.904        
cufflinks 0.523       Low
cufflinks 1.318       High
cufflinks 1.236        
cufflinks 1.056        
cufflinks 1.304       High
cufflinks 1.067        
cufflinks 0.618       Low
cufflinks 1.399       High
cufflinks 1.098        
cufflinks 1.01        
cufflinks 0.703       Low
cufflinks 1.081        
cufflinks 0.793        
cufflinks 0.705       Low
cufflinks 1.031        
cufflinks 0.805        

0 Strain