Gene : Glyma.12G093500 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR12341 - 5'->3' EXORIBONUCLEASE Genomic Order:  935
Name:  ? Glyma.12G093500 Secondary Identifier:  ? PAC:30548031
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G093500 0.5kb upstream 0.5kb upstream 7570 true Chr12: 7645332-7652901 Glycine max
Glyma.12G093500 0.5kb upstream 0.5kb upstream 500 false Chr12: 7652402-7652901 Glycine max
Glyma.12G093500 0.5kb downstream 0.5kb downstream 7570 true Chr12: 7644832-7652401 Glycine max
Glyma.12G093500 0.5kb downstream 0.5kb downstream 500 false Chr12: 7644832-7645331 Glycine max
Glyma.12G093500 1.0kb upstream 1.0kb upstream 8070 true Chr12: 7645332-7653401 Glycine max
Glyma.12G093500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 7652402-7653401 Glycine max
Glyma.12G093500 1.0kb downstream 1.0kb downstream 8070 true Chr12: 7644332-7652401 Glycine max
Glyma.12G093500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 7644332-7645331 Glycine max
Glyma.12G093500 2.0kb upstream 2.0kb upstream 9070 true Chr12: 7645332-7654401 Glycine max
Glyma.12G093500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 7652402-7654401 Glycine max
Glyma.12G093500 2.0kb downstream 2.0kb downstream 9070 true Chr12: 7643332-7652401 Glycine max
Glyma.12G093500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 7643332-7645331 Glycine max
Glyma.12G093500 5.0kb upstream 5.0kb upstream 12070 true Chr12: 7645332-7657401 Glycine max
Glyma.12G093500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 7652402-7657401 Glycine max
Glyma.12G093500 5.0kb downstream 5.0kb downstream 12070 true Chr12: 7640332-7652401 Glycine max
Glyma.12G093500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 7640332-7645331 Glycine max
Glyma.12G093500 10.0kb upstream 10.0kb upstream 17070 true Chr12: 7645332-7662401 Glycine max
Glyma.12G093500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 7652402-7662401 Glycine max
Glyma.12G093500 10.0kb downstream 10.0kb downstream 17070 true Chr12: 7635332-7652401 Glycine max
Glyma.12G093500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 7635332-7645331 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306137 5265 Fabidae View MSA
124038496 5270 Rosid View MSA
123744082 5271 Pentapetalae View MSA
122796616 5272 Eudicot View MSA
122050556 5273 Angiosperm View MSA
123429022 5275 Viridiplantae View MSA
121311990 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0345272 0.0 0.14313 Low Low
cufflinks 0.737672 0.0 4.8399   High
cufflinks 0.920939 0.0 5.72854   High
cufflinks 0.30132 0.0 1.91763    
cufflinks 0.069906 0.0 0.277457 Low  
cufflinks 0.172359 0.0 1.44014 Low  
cufflinks 0.156317 0.0 1.05798 Low  
cufflinks 0.244862 0.0 1.5747    
cufflinks 0.125334 0.0 0.486275 Low  
cufflinks 0.081     Low  
cufflinks 0.035     Low  
cufflinks 0.103     Low  
cufflinks 0.025     Low  
cufflinks 0.015     Low  
cufflinks 0.001     Low Low
cufflinks 0.059     Low  
cufflinks 0.012     Low  
cufflinks 0.246       High
cufflinks 0.16       High
cufflinks 0.036     Low  
cufflinks 0.015     Low  
cufflinks 0.054     Low  
cufflinks 0.037     Low  
cufflinks 0.05     Low  
cufflinks 0.066     Low  
cufflinks 0.007     Low Low

0 Strain