Gene : Glyma.12G199400 G. max Wm82.a2.v1
Defline:  (1 of 2) 1.10.9.1 - Plastoquinol--plastocyanin reductase / Cytochrome b6f complex Genomic Order:  1994
Name:  ? Glyma.12G199400 Secondary Identifier:  ? PAC:30547170
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PHOTOALL-PWY Glycine max pathologic  
Gmax PWY-101 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G199400 0.5kb upstream 0.5kb upstream 3812 true Chr12: 36078545-36082356 Glycine max
Glyma.12G199400 0.5kb upstream 0.5kb upstream 500 false Chr12: 36078545-36079044 Glycine max
Glyma.12G199400 0.5kb downstream 0.5kb downstream 3812 true Chr12: 36079045-36082856 Glycine max
Glyma.12G199400 0.5kb downstream 0.5kb downstream 500 false Chr12: 36082357-36082856 Glycine max
Glyma.12G199400 1.0kb upstream 1.0kb upstream 4312 true Chr12: 36078045-36082356 Glycine max
Glyma.12G199400 1.0kb upstream 1.0kb upstream 1000 false Chr12: 36078045-36079044 Glycine max
Glyma.12G199400 1.0kb downstream 1.0kb downstream 4312 true Chr12: 36079045-36083356 Glycine max
Glyma.12G199400 1.0kb downstream 1.0kb downstream 1000 false Chr12: 36082357-36083356 Glycine max
Glyma.12G199400 2.0kb upstream 2.0kb upstream 5312 true Chr12: 36077045-36082356 Glycine max
Glyma.12G199400 2.0kb upstream 2.0kb upstream 2000 false Chr12: 36077045-36079044 Glycine max
Glyma.12G199400 2.0kb downstream 2.0kb downstream 5312 true Chr12: 36079045-36084356 Glycine max
Glyma.12G199400 2.0kb downstream 2.0kb downstream 2000 false Chr12: 36082357-36084356 Glycine max
Glyma.12G199400 5.0kb upstream 5.0kb upstream 8312 true Chr12: 36074045-36082356 Glycine max
Glyma.12G199400 5.0kb upstream 5.0kb upstream 5000 false Chr12: 36074045-36079044 Glycine max
Glyma.12G199400 5.0kb downstream 5.0kb downstream 8312 true Chr12: 36079045-36087356 Glycine max
Glyma.12G199400 5.0kb downstream 5.0kb downstream 5000 false Chr12: 36082357-36087356 Glycine max
Glyma.12G199400 10.0kb upstream 10.0kb upstream 13312 true Chr12: 36069045-36082356 Glycine max
Glyma.12G199400 10.0kb upstream 10.0kb upstream 10000 false Chr12: 36069045-36079044 Glycine max
Glyma.12G199400 10.0kb downstream 10.0kb downstream 13312 true Chr12: 36079045-36092356 Glycine max
Glyma.12G199400 10.0kb downstream 10.0kb downstream 10000 false Chr12: 36082357-36092356 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301279 5265 Fabidae View MSA
124073060 5270 Rosid View MSA
123737463 5271 Pentapetalae View MSA
122790798 5272 Eudicot View MSA
122045987 5273 Angiosperm View MSA
121343796 5274 Embryophyte View MSA
123424591 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 288.408 0.0 1004.08 High High
cufflinks 106.853 0.0 309.922 High  
cufflinks 26.7079 0.0 71.3064 High  
cufflinks 66.9054 0.0 184.316 High  
cufflinks 5.25016 0.0 16.2829   Low
cufflinks 6.24186 0.0 18.8802   Low
cufflinks 70.5414 0.0 195.332 High  
cufflinks 56.8272 0.0 155.044 High  
cufflinks 5.54549 0.0 17.0183   Low
cufflinks 26.602     High  
cufflinks 0.441        
cufflinks 11.837     High  
cufflinks 0.029     Low Low
cufflinks 0.072     Low Low
cufflinks 3.717        
cufflinks 123.607     High High
cufflinks 0.023     Low Low
cufflinks 18.854     High  
cufflinks 24.809     High  
cufflinks 142.949     High High
cufflinks 0.216        
cufflinks 126.956     High High
cufflinks 92.411     High  
cufflinks 0.193        
cufflinks 144.85     High High
cufflinks 0.046     Low Low

0 Strain