Gene : Glyma.13G333700 G. max Wm82.a2.v1
Defline:  (1 of 477) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  3337
Name:  ? Glyma.13G333700 Secondary Identifier:  ? PAC:30506103
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G333700 0.5kb upstream 0.5kb upstream 3241 true Chr13: 42766142-42769382 Glycine max
Glyma.13G333700 0.5kb upstream 0.5kb upstream 500 false Chr13: 42766142-42766641 Glycine max
Glyma.13G333700 0.5kb downstream 0.5kb downstream 3241 true Chr13: 42766642-42769882 Glycine max
Glyma.13G333700 0.5kb downstream 0.5kb downstream 500 false Chr13: 42769383-42769882 Glycine max
Glyma.13G333700 1.0kb upstream 1.0kb upstream 3741 true Chr13: 42765642-42769382 Glycine max
Glyma.13G333700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 42765642-42766641 Glycine max
Glyma.13G333700 1.0kb downstream 1.0kb downstream 3741 true Chr13: 42766642-42770382 Glycine max
Glyma.13G333700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 42769383-42770382 Glycine max
Glyma.13G333700 2.0kb upstream 2.0kb upstream 4741 true Chr13: 42764642-42769382 Glycine max
Glyma.13G333700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 42764642-42766641 Glycine max
Glyma.13G333700 2.0kb downstream 2.0kb downstream 4741 true Chr13: 42766642-42771382 Glycine max
Glyma.13G333700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 42769383-42771382 Glycine max
Glyma.13G333700 5.0kb upstream 5.0kb upstream 7741 true Chr13: 42761642-42769382 Glycine max
Glyma.13G333700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 42761642-42766641 Glycine max
Glyma.13G333700 5.0kb downstream 5.0kb downstream 7741 true Chr13: 42766642-42774382 Glycine max
Glyma.13G333700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 42769383-42774382 Glycine max
Glyma.13G333700 10.0kb upstream 10.0kb upstream 12741 true Chr13: 42756642-42769382 Glycine max
Glyma.13G333700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 42756642-42766641 Glycine max
Glyma.13G333700 10.0kb downstream 10.0kb downstream 12741 true Chr13: 42766642-42779382 Glycine max
Glyma.13G333700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 42769383-42779382 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301038 5265 Fabidae View MSA
124061661 5270 Rosid View MSA
123747843 5271 Pentapetalae View MSA
122790614 5272 Eudicot View MSA
122044868 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.0905 0.0 16.0643    
cufflinks 3.60878 0.0 14.2386    
cufflinks 0.675631 0.0 2.58009   Low
cufflinks 0.950704 0.0 4.66087   Low
cufflinks 4.88209 0.0 24.0415    
cufflinks 2.30201 0.0 13.3733    
cufflinks 2.20898 0.0 12.8854    
cufflinks 2.8399 0.0 12.1573    
cufflinks 6.45937 0.0 29.0756   High
cufflinks 0.44        
cufflinks 0.354       Low
cufflinks 0.357       Low
cufflinks 1.236       High
cufflinks 1.608       High
cufflinks 0.967       High
cufflinks 0.642        
cufflinks 0.415        
cufflinks 0.666        
cufflinks 0.935        
cufflinks 0.536        
cufflinks 0.346       Low
cufflinks 0.682        
cufflinks 0.704        
cufflinks 0.457        
cufflinks 0.623        
cufflinks 0.509        

0 Strain