Gene : Glyma.14G119400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS Genomic Order:  1194
Name:  ? Glyma.14G119400 Secondary Identifier:  ? PAC:30534441
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G119400 0.5kb upstream 0.5kb upstream 4751 true Chr14: 16667481-16672231 Glycine max
Glyma.14G119400 0.5kb upstream 0.5kb upstream 500 false Chr14: 16667481-16667980 Glycine max
Glyma.14G119400 0.5kb downstream 0.5kb downstream 4751 true Chr14: 16667981-16672731 Glycine max
Glyma.14G119400 0.5kb downstream 0.5kb downstream 500 false Chr14: 16672232-16672731 Glycine max
Glyma.14G119400 1.0kb upstream 1.0kb upstream 5251 true Chr14: 16666981-16672231 Glycine max
Glyma.14G119400 1.0kb upstream 1.0kb upstream 1000 false Chr14: 16666981-16667980 Glycine max
Glyma.14G119400 1.0kb downstream 1.0kb downstream 5251 true Chr14: 16667981-16673231 Glycine max
Glyma.14G119400 1.0kb downstream 1.0kb downstream 1000 false Chr14: 16672232-16673231 Glycine max
Glyma.14G119400 2.0kb upstream 2.0kb upstream 6251 true Chr14: 16665981-16672231 Glycine max
Glyma.14G119400 2.0kb upstream 2.0kb upstream 2000 false Chr14: 16665981-16667980 Glycine max
Glyma.14G119400 2.0kb downstream 2.0kb downstream 6251 true Chr14: 16667981-16674231 Glycine max
Glyma.14G119400 2.0kb downstream 2.0kb downstream 2000 false Chr14: 16672232-16674231 Glycine max
Glyma.14G119400 5.0kb upstream 5.0kb upstream 9251 true Chr14: 16662981-16672231 Glycine max
Glyma.14G119400 5.0kb upstream 5.0kb upstream 5000 false Chr14: 16662981-16667980 Glycine max
Glyma.14G119400 5.0kb downstream 5.0kb downstream 9251 true Chr14: 16667981-16677231 Glycine max
Glyma.14G119400 5.0kb downstream 5.0kb downstream 5000 false Chr14: 16672232-16677231 Glycine max
Glyma.14G119400 10.0kb upstream 10.0kb upstream 14251 true Chr14: 16657981-16672231 Glycine max
Glyma.14G119400 10.0kb upstream 10.0kb upstream 10000 false Chr14: 16657981-16667980 Glycine max
Glyma.14G119400 10.0kb downstream 10.0kb downstream 14251 true Chr14: 16667981-16682231 Glycine max
Glyma.14G119400 10.0kb downstream 10.0kb downstream 10000 false Chr14: 16672232-16682231 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301541 5265 Fabidae View MSA
124061735 5270 Rosid View MSA
123739408 5271 Pentapetalae View MSA
122786845 5272 Eudicot View MSA
122043852 5273 Angiosperm View MSA
121346736 5274 Embryophyte View MSA
123428704 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.72607 0.0 25.4649    
cufflinks 8.53386 0.0 30.6453    
cufflinks 19.6558 0.0 59.9329   High
cufflinks 8.32358 0.0 26.9797    
cufflinks 8.80997 0.0 27.26    
cufflinks 4.85847 0.0 17.0228   Low
cufflinks 7.94269 0.0 26.0584    
cufflinks 9.43817 0.0 30.5049    
cufflinks 4.76636 0.0 17.7873   Low
cufflinks 1.595        
cufflinks 1.062        
cufflinks 3.798       High
cufflinks 1.569        
cufflinks 2.218       High
cufflinks 1.299        
cufflinks 1.199        
cufflinks 0.871       Low
cufflinks 2.736       High
cufflinks 2.397       High
cufflinks 0.862       Low
cufflinks 1.223        
cufflinks 1.09        
cufflinks 1.45        
cufflinks 1.129        
cufflinks 1.077        
cufflinks 1.166        

0 Strain