Gene : Glyma.16G070900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24012:SF426 - RNA-BINDING PROTEIN-RELATED Genomic Order:  709
Name:  ? Glyma.16G070900 Secondary Identifier:  ? PAC:30559532
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G070900 0.5kb upstream 0.5kb upstream 4719 true Chr16: 7079250-7083968 Glycine max
Glyma.16G070900 0.5kb upstream 0.5kb upstream 500 false Chr16: 7083469-7083968 Glycine max
Glyma.16G070900 0.5kb downstream 0.5kb downstream 4719 true Chr16: 7078750-7083468 Glycine max
Glyma.16G070900 0.5kb downstream 0.5kb downstream 500 false Chr16: 7078750-7079249 Glycine max
Glyma.16G070900 1.0kb upstream 1.0kb upstream 5219 true Chr16: 7079250-7084468 Glycine max
Glyma.16G070900 1.0kb upstream 1.0kb upstream 1000 false Chr16: 7083469-7084468 Glycine max
Glyma.16G070900 1.0kb downstream 1.0kb downstream 5219 true Chr16: 7078250-7083468 Glycine max
Glyma.16G070900 1.0kb downstream 1.0kb downstream 1000 false Chr16: 7078250-7079249 Glycine max
Glyma.16G070900 2.0kb upstream 2.0kb upstream 6219 true Chr16: 7079250-7085468 Glycine max
Glyma.16G070900 2.0kb upstream 2.0kb upstream 2000 false Chr16: 7083469-7085468 Glycine max
Glyma.16G070900 2.0kb downstream 2.0kb downstream 6219 true Chr16: 7077250-7083468 Glycine max
Glyma.16G070900 2.0kb downstream 2.0kb downstream 2000 false Chr16: 7077250-7079249 Glycine max
Glyma.16G070900 5.0kb upstream 5.0kb upstream 9219 true Chr16: 7079250-7088468 Glycine max
Glyma.16G070900 5.0kb upstream 5.0kb upstream 5000 false Chr16: 7083469-7088468 Glycine max
Glyma.16G070900 5.0kb downstream 5.0kb downstream 9219 true Chr16: 7074250-7083468 Glycine max
Glyma.16G070900 5.0kb downstream 5.0kb downstream 5000 false Chr16: 7074250-7079249 Glycine max
Glyma.16G070900 10.0kb upstream 10.0kb upstream 14219 true Chr16: 7079250-7093468 Glycine max
Glyma.16G070900 10.0kb upstream 10.0kb upstream 10000 false Chr16: 7083469-7093468 Glycine max
Glyma.16G070900 10.0kb downstream 10.0kb downstream 14219 true Chr16: 7069250-7083468 Glycine max
Glyma.16G070900 10.0kb downstream 10.0kb downstream 10000 false Chr16: 7069250-7079249 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311921 5265 Fabidae View MSA
124068966 5270 Rosid View MSA
123749875 5271 Pentapetalae View MSA
122795873 5272 Eudicot View MSA
122049849 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351304 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.5481 0.0 41.6166    
cufflinks 17.8358 0.0 47.6414    
cufflinks 13.6834 0.0 36.8077   Low
cufflinks 15.379 0.0 41.2069    
cufflinks 23.6985 0.0 63.3324 High High
cufflinks 17.8394 0.0 47.6249    
cufflinks 21.6433 0.0 57.7584   High
cufflinks 17.7377 0.0 47.3805    
cufflinks 17.8416 0.0 47.6433    
cufflinks 5.877        
cufflinks 6.539     High  
cufflinks 6.319        
cufflinks 10.77     High High
cufflinks 13.901     High High
cufflinks 4.68       Low
cufflinks 7.385     High  
cufflinks 6.471     High  
cufflinks 6.143        
cufflinks 8.659     High  
cufflinks 6.937     High  
cufflinks 6.394     High  
cufflinks 6.94        
cufflinks 9.478     High High
cufflinks 6.731     High  
cufflinks 6.945     High  
cufflinks 7.247     High  

0 Strain