Gene : Glyma.16G121300 G. max Wm82.a2.v1
Defline:  (1 of 3) KOG0107//KOG0114 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) Genomic Order:  1213
Name:  ? Glyma.16G121300 Secondary Identifier:  ? PAC:30558859
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G121300 0.5kb upstream 0.5kb upstream 3728 true Chr16: 26983035-26986762 Glycine max
Glyma.16G121300 0.5kb upstream 0.5kb upstream 500 false Chr16: 26983035-26983534 Glycine max
Glyma.16G121300 0.5kb downstream 0.5kb downstream 3728 true Chr16: 26983535-26987262 Glycine max
Glyma.16G121300 0.5kb downstream 0.5kb downstream 500 false Chr16: 26986763-26987262 Glycine max
Glyma.16G121300 1.0kb upstream 1.0kb upstream 4228 true Chr16: 26982535-26986762 Glycine max
Glyma.16G121300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 26982535-26983534 Glycine max
Glyma.16G121300 1.0kb downstream 1.0kb downstream 4228 true Chr16: 26983535-26987762 Glycine max
Glyma.16G121300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 26986763-26987762 Glycine max
Glyma.16G121300 2.0kb upstream 2.0kb upstream 5228 true Chr16: 26981535-26986762 Glycine max
Glyma.16G121300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 26981535-26983534 Glycine max
Glyma.16G121300 2.0kb downstream 2.0kb downstream 5228 true Chr16: 26983535-26988762 Glycine max
Glyma.16G121300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 26986763-26988762 Glycine max
Glyma.16G121300 5.0kb upstream 5.0kb upstream 8228 true Chr16: 26978535-26986762 Glycine max
Glyma.16G121300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 26978535-26983534 Glycine max
Glyma.16G121300 5.0kb downstream 5.0kb downstream 8228 true Chr16: 26983535-26991762 Glycine max
Glyma.16G121300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 26986763-26991762 Glycine max
Glyma.16G121300 10.0kb upstream 10.0kb upstream 13228 true Chr16: 26973535-26986762 Glycine max
Glyma.16G121300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 26973535-26983534 Glycine max
Glyma.16G121300 10.0kb downstream 10.0kb downstream 13228 true Chr16: 26983535-26996762 Glycine max
Glyma.16G121300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 26986763-26996762 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309837 5265 Fabidae View MSA
124070278 5270 Rosid View MSA
123749009 5271 Pentapetalae View MSA
122794925 5272 Eudicot View MSA
122049449 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351469 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.8155 0.0 53.4476    
cufflinks 15.5239 0.0 73.8364   High
cufflinks 13.0407 0.0 66.3834    
cufflinks 11.8465 0.0 59.7489    
cufflinks 13.986 0.0 67.8049    
cufflinks 8.93601 0.0 44.7577   Low
cufflinks 11.932 0.0 59.0287    
cufflinks 13.9479 0.0 64.2716    
cufflinks 9.68244 0.0 48.5062   Low
cufflinks 0.803        
cufflinks 0.596       Low
cufflinks 1.141        
cufflinks 0.945        
cufflinks 1.325       High
cufflinks 0.762        
cufflinks 1.079        
cufflinks 0.458       Low
cufflinks 1.184        
cufflinks 1.672       High
cufflinks 0.986        
cufflinks 0.701        
cufflinks 1.031        
cufflinks 1.186        
cufflinks 0.646       Low
cufflinks 1.041        
cufflinks 0.674        

0 Strain