Gene : Glyma.17G100300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33415:SF3 - EMB514 Genomic Order:  1003
Name:  ? Glyma.17G100300 Secondary Identifier:  ? PAC:30479959
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G100300 0.5kb upstream 0.5kb upstream 2078   true Chr17: 7907773-7909850 Glycine max
Glyma.17G100300 0.5kb upstream 0.5kb upstream 500   false Chr17: 7909351-7909850 Glycine max
Glyma.17G100300 0.5kb downstream 0.5kb downstream 2078   true Chr17: 7907273-7909350 Glycine max
Glyma.17G100300 0.5kb downstream 0.5kb downstream 500   false Chr17: 7907273-7907772 Glycine max
Glyma.17G100300 1.0kb upstream 1.0kb upstream 2578   true Chr17: 7907773-7910350 Glycine max
Glyma.17G100300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 7909351-7910350 Glycine max
Glyma.17G100300 1.0kb downstream 1.0kb downstream 2578   true Chr17: 7906773-7909350 Glycine max
Glyma.17G100300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 7906773-7907772 Glycine max
Glyma.17G100300 2.0kb upstream 2.0kb upstream 3578   true Chr17: 7907773-7911350 Glycine max
Glyma.17G100300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 7909351-7911350 Glycine max
Glyma.17G100300 2.0kb downstream 2.0kb downstream 3578   true Chr17: 7905773-7909350 Glycine max
Glyma.17G100300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 7905773-7907772 Glycine max
Glyma.17G100300 5.0kb upstream 5.0kb upstream 6578   true Chr17: 7907773-7914350 Glycine max
Glyma.17G100300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 7909351-7914350 Glycine max
Glyma.17G100300 5.0kb downstream 5.0kb downstream 6578   true Chr17: 7902773-7909350 Glycine max
Glyma.17G100300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 7902773-7907772 Glycine max
Glyma.17G100300 10.0kb upstream 10.0kb upstream 11578   true Chr17: 7907773-7919350 Glycine max
Glyma.17G100300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 7909351-7919350 Glycine max
Glyma.17G100300 10.0kb downstream 10.0kb downstream 11578   true Chr17: 7897773-7909350 Glycine max
Glyma.17G100300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 7897773-7907772 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254811 5265 Fabidae View MSA
124063233 5270 Rosid View MSA
123742093 5271 Pentapetalae View MSA
122792599 5272 Eudicot View MSA
122051410 5273 Angiosperm View MSA
121348604 5274 Embryophyte View MSA
123426725 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.5421 0.0 8.65371    
cufflinks 3.41969 0.0 11.2146    
cufflinks 3.87436 0.0 12.4839   High
cufflinks 1.51206 0.0 5.38565   Low
cufflinks 2.44644 0.0 8.34755    
cufflinks 4.32424 0.0 13.7212   High
cufflinks 2.58855 0.0 8.79456    
cufflinks 1.71299 0.0 6.04069   Low
cufflinks 1.90359 0.0 6.65948    
cufflinks 0.902       Low
cufflinks 1.447        
cufflinks 2.223       High
cufflinks 1.547        
cufflinks 2.256       High
cufflinks 1.736        
cufflinks 1.723        
cufflinks 0.571       Low
cufflinks 1.442        
cufflinks 2.14       High
cufflinks 1.467        
cufflinks 0.781       Low
cufflinks 1.884        
cufflinks 1.508        
cufflinks 1.53        
cufflinks 1.745        
cufflinks 1.016        

0 Strain