Gene : Glyma.17G257100 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR12341 - 5'->3' EXORIBONUCLEASE Genomic Order:  2571
Name:  ? Glyma.17G257100 Secondary Identifier:  ? PAC:30481304
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G257100 0.5kb upstream 0.5kb upstream 12406   true Chr17: 41112621-41125026 Glycine max
Glyma.17G257100 0.5kb upstream 0.5kb upstream 500   false Chr17: 41112621-41113120 Glycine max
Glyma.17G257100 0.5kb downstream 0.5kb downstream 12406   true Chr17: 41113121-41125526 Glycine max
Glyma.17G257100 0.5kb downstream 0.5kb downstream 500   false Chr17: 41125027-41125526 Glycine max
Glyma.17G257100 1.0kb upstream 1.0kb upstream 12906   true Chr17: 41112121-41125026 Glycine max
Glyma.17G257100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 41112121-41113120 Glycine max
Glyma.17G257100 1.0kb downstream 1.0kb downstream 12906   true Chr17: 41113121-41126026 Glycine max
Glyma.17G257100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 41125027-41126026 Glycine max
Glyma.17G257100 2.0kb upstream 2.0kb upstream 13906   true Chr17: 41111121-41125026 Glycine max
Glyma.17G257100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 41111121-41113120 Glycine max
Glyma.17G257100 2.0kb downstream 2.0kb downstream 13906   true Chr17: 41113121-41127026 Glycine max
Glyma.17G257100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 41125027-41127026 Glycine max
Glyma.17G257100 5.0kb upstream 5.0kb upstream 16906   true Chr17: 41108121-41125026 Glycine max
Glyma.17G257100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 41108121-41113120 Glycine max
Glyma.17G257100 5.0kb downstream 5.0kb downstream 16906   true Chr17: 41113121-41130026 Glycine max
Glyma.17G257100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 41125027-41130026 Glycine max
Glyma.17G257100 10.0kb upstream 10.0kb upstream 21906   true Chr17: 41103121-41125026 Glycine max
Glyma.17G257100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 41103121-41113120 Glycine max
Glyma.17G257100 10.0kb downstream 10.0kb downstream 21906   true Chr17: 41113121-41135026 Glycine max
Glyma.17G257100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 41125027-41135026 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026403 5273 Angiosperm View MSA
122300332 5265 Fabidae View MSA
124066178 5270 Rosid View MSA
123742031 5271 Pentapetalae View MSA
122789000 5272 Eudicot View MSA
123429022 5275 Viridiplantae View MSA
121350547 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.4548 0.0 53.1863    
cufflinks 10.5863 0.0 32.2178    
cufflinks 20.6413 0.0 70.7862 High High
cufflinks 12.9897 0.0 40.7111    
cufflinks 10.3531 0.0 31.7645    
cufflinks 7.61948 0.0 23.5128   Low
cufflinks 17.9239 0.0 59.1747   High
cufflinks 10.5568 0.0 32.0473    
cufflinks 9.75261 0.0 30.0825    
cufflinks 1.672       Low
cufflinks 2.54        
cufflinks 2.691        
cufflinks 1.613       Low
cufflinks 1.797       Low
cufflinks 3.391       High
cufflinks 2.671        
cufflinks 1.731       Low
cufflinks 2.366        
cufflinks 2.173        
cufflinks 3.032       High
cufflinks 2.459        
cufflinks 2.974       High
cufflinks 2.587        
cufflinks 2.562        
cufflinks 2.955        
cufflinks 2.121        

0 Strain