Gene : Glyma.18G147900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11439//PTHR11439:SF167 - GAG-POL-RELATED RETROTRANSPOSON Genomic Order:  1479
Name:  ? Glyma.18G147900 Secondary Identifier:  ? PAC:30557958
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G147900 0.5kb upstream 0.5kb upstream 839 true Chr18: 25316873-25317711 Glycine max
Glyma.18G147900 0.5kb upstream 0.5kb upstream 500 false Chr18: 25317212-25317711 Glycine max
Glyma.18G147900 0.5kb downstream 0.5kb downstream 839 true Chr18: 25316373-25317211 Glycine max
Glyma.18G147900 0.5kb downstream 0.5kb downstream 500 false Chr18: 25316373-25316872 Glycine max
Glyma.18G147900 1.0kb upstream 1.0kb upstream 1339 true Chr18: 25316873-25318211 Glycine max
Glyma.18G147900 1.0kb upstream 1.0kb upstream 1000 false Chr18: 25317212-25318211 Glycine max
Glyma.18G147900 1.0kb downstream 1.0kb downstream 1339 true Chr18: 25315873-25317211 Glycine max
Glyma.18G147900 1.0kb downstream 1.0kb downstream 1000 false Chr18: 25315873-25316872 Glycine max
Glyma.18G147900 2.0kb upstream 2.0kb upstream 2339 true Chr18: 25316873-25319211 Glycine max
Glyma.18G147900 2.0kb upstream 2.0kb upstream 2000 false Chr18: 25317212-25319211 Glycine max
Glyma.18G147900 2.0kb downstream 2.0kb downstream 2339 true Chr18: 25314873-25317211 Glycine max
Glyma.18G147900 2.0kb downstream 2.0kb downstream 2000 false Chr18: 25314873-25316872 Glycine max
Glyma.18G147900 5.0kb upstream 5.0kb upstream 5339 true Chr18: 25316873-25322211 Glycine max
Glyma.18G147900 5.0kb upstream 5.0kb upstream 5000 false Chr18: 25317212-25322211 Glycine max
Glyma.18G147900 5.0kb downstream 5.0kb downstream 5339 true Chr18: 25311873-25317211 Glycine max
Glyma.18G147900 5.0kb downstream 5.0kb downstream 5000 false Chr18: 25311873-25316872 Glycine max
Glyma.18G147900 10.0kb upstream 10.0kb upstream 10339 true Chr18: 25316873-25327211 Glycine max
Glyma.18G147900 10.0kb upstream 10.0kb upstream 10000 false Chr18: 25317212-25327211 Glycine max
Glyma.18G147900 10.0kb downstream 10.0kb downstream 10339 true Chr18: 25306873-25317211 Glycine max
Glyma.18G147900 10.0kb downstream 10.0kb downstream 10000 false Chr18: 25306873-25316872 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309396 5265 Fabidae View MSA
124074671 5270 Rosid View MSA
123753620 5271 Pentapetalae View MSA
122797847 5272 Eudicot View MSA
122051084 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain