Gene : Glyma.18G171900 G. max Wm82.a2.v1
Defline:  (1 of 2) PF12452 - Protein of unknown function (DUF3685) (DUF3685) Genomic Order:  1719
Name:  ? Glyma.18G171900 Secondary Identifier:  ? PAC:30555936
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G171900 0.5kb upstream 0.5kb upstream 8273 true Chr18: 40625211-40633483 Glycine max
Glyma.18G171900 0.5kb upstream 0.5kb upstream 500 false Chr18: 40632984-40633483 Glycine max
Glyma.18G171900 0.5kb downstream 0.5kb downstream 8273 true Chr18: 40624711-40632983 Glycine max
Glyma.18G171900 0.5kb downstream 0.5kb downstream 500 false Chr18: 40624711-40625210 Glycine max
Glyma.18G171900 1.0kb upstream 1.0kb upstream 8773 true Chr18: 40625211-40633983 Glycine max
Glyma.18G171900 1.0kb upstream 1.0kb upstream 1000 false Chr18: 40632984-40633983 Glycine max
Glyma.18G171900 1.0kb downstream 1.0kb downstream 8773 true Chr18: 40624211-40632983 Glycine max
Glyma.18G171900 1.0kb downstream 1.0kb downstream 1000 false Chr18: 40624211-40625210 Glycine max
Glyma.18G171900 2.0kb upstream 2.0kb upstream 9773 true Chr18: 40625211-40634983 Glycine max
Glyma.18G171900 2.0kb upstream 2.0kb upstream 2000 false Chr18: 40632984-40634983 Glycine max
Glyma.18G171900 2.0kb downstream 2.0kb downstream 9773 true Chr18: 40623211-40632983 Glycine max
Glyma.18G171900 2.0kb downstream 2.0kb downstream 2000 false Chr18: 40623211-40625210 Glycine max
Glyma.18G171900 5.0kb upstream 5.0kb upstream 12773 true Chr18: 40625211-40637983 Glycine max
Glyma.18G171900 5.0kb upstream 5.0kb upstream 5000 false Chr18: 40632984-40637983 Glycine max
Glyma.18G171900 5.0kb downstream 5.0kb downstream 12773 true Chr18: 40620211-40632983 Glycine max
Glyma.18G171900 5.0kb downstream 5.0kb downstream 5000 false Chr18: 40620211-40625210 Glycine max
Glyma.18G171900 10.0kb upstream 10.0kb upstream 17773 true Chr18: 40625211-40642983 Glycine max
Glyma.18G171900 10.0kb upstream 10.0kb upstream 10000 false Chr18: 40632984-40642983 Glycine max
Glyma.18G171900 10.0kb downstream 10.0kb downstream 17773 true Chr18: 40615211-40632983 Glycine max
Glyma.18G171900 10.0kb downstream 10.0kb downstream 10000 false Chr18: 40615211-40625210 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308912 5265 Fabidae View MSA
124065521 5270 Rosid View MSA
123739114 5271 Pentapetalae View MSA
122786546 5272 Eudicot View MSA
122046788 5273 Angiosperm View MSA
121346077 5274 Embryophyte View MSA
123380322 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.91355 0.0 17.0574   High
cufflinks 4.71273 0.0 19.4295   High
cufflinks 1.87151 0.0 10.2343    
cufflinks 2.23111 0.0 11.6516    
cufflinks 2.47578 0.0 12.5949    
cufflinks 1.41919 0.0 9.09412   Low
cufflinks 3.25254 0.0 15.1787    
cufflinks 1.92953 0.0 10.7226    
cufflinks 2.74936 0.0 13.8832    
cufflinks 0.264        
cufflinks 0.019     Low Low
cufflinks 0.388        
cufflinks 0.257        
cufflinks 0.354        
cufflinks 0.065        
cufflinks 1.213       High
cufflinks 0.047     Low Low
cufflinks 0.564        
cufflinks 0.607        
cufflinks 1.526       High
cufflinks 0.03     Low Low
cufflinks 1.322       High
cufflinks 1.495       High
cufflinks 0.035     Low Low
cufflinks 1.388       High
cufflinks 0.043     Low Low

0 Strain