Gene : Glyma.01G241500 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR31412:SF2 - ZINC METALLOPEPTIDASE EGY3, CHLOROPLASTIC-RELATED Genomic Order:  2415
Name:  ? Glyma.01G241500 Secondary Identifier:  ? PAC:30543058
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G241500 0.5kb upstream 0.5kb upstream 4285 true Chr01: 56542550-56546834 Glycine max
Glyma.01G241500 0.5kb upstream 0.5kb upstream 500 false Chr01: 56546335-56546834 Glycine max
Glyma.01G241500 0.5kb downstream 0.5kb downstream 4285 true Chr01: 56542050-56546334 Glycine max
Glyma.01G241500 0.5kb downstream 0.5kb downstream 500 false Chr01: 56542050-56542549 Glycine max
Glyma.01G241500 1.0kb upstream 1.0kb upstream 4785 true Chr01: 56542550-56547334 Glycine max
Glyma.01G241500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 56546335-56547334 Glycine max
Glyma.01G241500 1.0kb downstream 1.0kb downstream 4785 true Chr01: 56541550-56546334 Glycine max
Glyma.01G241500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 56541550-56542549 Glycine max
Glyma.01G241500 2.0kb upstream 2.0kb upstream 5785 true Chr01: 56542550-56548334 Glycine max
Glyma.01G241500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 56546335-56548334 Glycine max
Glyma.01G241500 2.0kb downstream 2.0kb downstream 5785 true Chr01: 56540550-56546334 Glycine max
Glyma.01G241500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 56540550-56542549 Glycine max
Glyma.01G241500 5.0kb upstream 5.0kb upstream 8785 true Chr01: 56542550-56551334 Glycine max
Glyma.01G241500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 56546335-56551334 Glycine max
Glyma.01G241500 5.0kb downstream 5.0kb downstream 8785 true Chr01: 56537550-56546334 Glycine max
Glyma.01G241500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 56537550-56542549 Glycine max
Glyma.01G241500 10.0kb upstream 10.0kb upstream 13785 true Chr01: 56542550-56556334 Glycine max
Glyma.01G241500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 56546335-56556334 Glycine max
Glyma.01G241500 10.0kb downstream 10.0kb downstream 13785 true Chr01: 56532550-56546334 Glycine max
Glyma.01G241500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 56532550-56542549 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311033 5265 Fabidae View MSA
124067271 5270 Rosid View MSA
123738003 5271 Pentapetalae View MSA
122792522 5272 Eudicot View MSA
122042498 5273 Angiosperm View MSA
121347143 5274 Embryophyte View MSA
123425233 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.53889 0.0 13.1873    
cufflinks 5.03955 0.0 14.4546    
cufflinks 3.79168 0.0 11.2617    
cufflinks 5.08647 0.0 14.5601    
cufflinks 3.76293 0.0 11.1989    
cufflinks 0.92621 0.0 3.27355   Low
cufflinks 1.46133 0.0 4.95302    
cufflinks 13.3902 0.0 35.7938   High
cufflinks 0.685006 0.0 2.47286   Low
cufflinks 1.141        
cufflinks 0.674        
cufflinks 3.031       High
cufflinks 0.174        
cufflinks 0.168        
cufflinks 0.102       Low
cufflinks 1.712        
cufflinks 0.178        
cufflinks 4.552       High
cufflinks 2.277        
cufflinks 2.566        
cufflinks 0.128       Low
cufflinks 2.246        
cufflinks 2.111        
cufflinks 0.121       Low
cufflinks 2.236        
cufflinks 0.138       Low

0 Strain