Gene : Glyma.19G003900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24012:SF426 - RNA-BINDING PROTEIN-RELATED Genomic Order:  39
Name:  ? Glyma.19G003900 Secondary Identifier:  ? PAC:30514050
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G003900 0.5kb upstream 0.5kb upstream 4363 true Chr19: 295914-300276 Glycine max
Glyma.19G003900 0.5kb upstream 0.5kb upstream 500 false Chr19: 299777-300276 Glycine max
Glyma.19G003900 0.5kb downstream 0.5kb downstream 4363 true Chr19: 295414-299776 Glycine max
Glyma.19G003900 0.5kb downstream 0.5kb downstream 500 false Chr19: 295414-295913 Glycine max
Glyma.19G003900 1.0kb upstream 1.0kb upstream 4863 true Chr19: 295914-300776 Glycine max
Glyma.19G003900 1.0kb upstream 1.0kb upstream 1000 false Chr19: 299777-300776 Glycine max
Glyma.19G003900 1.0kb downstream 1.0kb downstream 4863 true Chr19: 294914-299776 Glycine max
Glyma.19G003900 1.0kb downstream 1.0kb downstream 1000 false Chr19: 294914-295913 Glycine max
Glyma.19G003900 2.0kb upstream 2.0kb upstream 5863 true Chr19: 295914-301776 Glycine max
Glyma.19G003900 2.0kb upstream 2.0kb upstream 2000 false Chr19: 299777-301776 Glycine max
Glyma.19G003900 2.0kb downstream 2.0kb downstream 5863 true Chr19: 293914-299776 Glycine max
Glyma.19G003900 2.0kb downstream 2.0kb downstream 2000 false Chr19: 293914-295913 Glycine max
Glyma.19G003900 5.0kb upstream 5.0kb upstream 8863 true Chr19: 295914-304776 Glycine max
Glyma.19G003900 5.0kb upstream 5.0kb upstream 5000 false Chr19: 299777-304776 Glycine max
Glyma.19G003900 5.0kb downstream 5.0kb downstream 8863 true Chr19: 290914-299776 Glycine max
Glyma.19G003900 5.0kb downstream 5.0kb downstream 5000 false Chr19: 290914-295913 Glycine max
Glyma.19G003900 10.0kb upstream 10.0kb upstream 13863 true Chr19: 295914-309776 Glycine max
Glyma.19G003900 10.0kb upstream 10.0kb upstream 10000 false Chr19: 299777-309776 Glycine max
Glyma.19G003900 10.0kb downstream 10.0kb downstream 13863 true Chr19: 285914-299776 Glycine max
Glyma.19G003900 10.0kb downstream 10.0kb downstream 10000 false Chr19: 285914-295913 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311921 5265 Fabidae View MSA
124068966 5270 Rosid View MSA
123749875 5271 Pentapetalae View MSA
122795873 5272 Eudicot View MSA
122049849 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351304 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.6286 0.0 55.0419    
cufflinks 18.4862 0.0 49.3376    
cufflinks 16.6487 0.0 44.4674    
cufflinks 15.3888 0.0 41.1818    
cufflinks 18.6103 0.0 49.6559    
cufflinks 12.1346 0.0 32.7489   Low
cufflinks 24.6727 0.0 66.0075 High High
cufflinks 17.451 0.0 46.6049    
cufflinks 19.2689 0.0 51.4094    
cufflinks 7.085       Low
cufflinks 9.891     High  
cufflinks 8.982     High  
cufflinks 9.639     High  
cufflinks 11.782     High High
cufflinks 8.588     High  
cufflinks 9.671     High  
cufflinks 8.637     High  
cufflinks 8.595     High  
cufflinks 9.768     High  
cufflinks 9.382     High  
cufflinks 9.33     High  
cufflinks 10.717     High  
cufflinks 11.503     High High
cufflinks 9.845     High  
cufflinks 9.22     High  
cufflinks 10.407     High  

0 Strain