Gene : Glyma.02G096000 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR23338 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM Genomic Order:  960
Name:  ? Glyma.02G096000 Secondary Identifier:  ? PAC:30506818
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G096000 0.5kb upstream 0.5kb upstream 2815 true Chr02: 8653241-8656055 Glycine max
Glyma.02G096000 0.5kb upstream 0.5kb upstream 500 false Chr02: 8653241-8653740 Glycine max
Glyma.02G096000 0.5kb downstream 0.5kb downstream 2815 true Chr02: 8653741-8656555 Glycine max
Glyma.02G096000 0.5kb downstream 0.5kb downstream 500 false Chr02: 8656056-8656555 Glycine max
Glyma.02G096000 1.0kb upstream 1.0kb upstream 3315 true Chr02: 8652741-8656055 Glycine max
Glyma.02G096000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 8652741-8653740 Glycine max
Glyma.02G096000 1.0kb downstream 1.0kb downstream 3315 true Chr02: 8653741-8657055 Glycine max
Glyma.02G096000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 8656056-8657055 Glycine max
Glyma.02G096000 2.0kb upstream 2.0kb upstream 4315 true Chr02: 8651741-8656055 Glycine max
Glyma.02G096000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 8651741-8653740 Glycine max
Glyma.02G096000 2.0kb downstream 2.0kb downstream 4315 true Chr02: 8653741-8658055 Glycine max
Glyma.02G096000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 8656056-8658055 Glycine max
Glyma.02G096000 5.0kb upstream 5.0kb upstream 7315 true Chr02: 8648741-8656055 Glycine max
Glyma.02G096000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 8648741-8653740 Glycine max
Glyma.02G096000 5.0kb downstream 5.0kb downstream 7315 true Chr02: 8653741-8661055 Glycine max
Glyma.02G096000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 8656056-8661055 Glycine max
Glyma.02G096000 10.0kb upstream 10.0kb upstream 12315 true Chr02: 8643741-8656055 Glycine max
Glyma.02G096000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 8643741-8653740 Glycine max
Glyma.02G096000 10.0kb downstream 10.0kb downstream 12315 true Chr02: 8653741-8666055 Glycine max
Glyma.02G096000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 8656056-8666055 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314520 5265 Fabidae View MSA
124060560 5270 Rosid View MSA
123750770 5271 Pentapetalae View MSA
122792948 5272 Eudicot View MSA
122045867 5273 Angiosperm View MSA
121351003 5274 Embryophyte View MSA
123426098 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.8008 0.0 38.8224   Low
cufflinks 29.6673 0.0 79.4244 High  
cufflinks 9.55502 0.0 28.0614   Low
cufflinks 18.4151 0.0 50.459    
cufflinks 29.5124 0.0 78.9948 High  
cufflinks 21.4277 0.0 58.1433    
cufflinks 23.2087 0.0 62.7104 High  
cufflinks 23.2241 0.0 62.6974 High  
cufflinks 26.4302 0.0 70.9877 High  
cufflinks 4.687        
cufflinks 1.022       Low
cufflinks 5.154        
cufflinks 10.169     High High
cufflinks 15.057     High High
cufflinks 2.08        
cufflinks 4.353        
cufflinks 2.813        
cufflinks 5.009        
cufflinks 8.98     High High
cufflinks 3.343        
cufflinks 1.561       Low
cufflinks 4.069        
cufflinks 6.908        
cufflinks 1.427       Low
cufflinks 3.596        
cufflinks 2.329        

0 Strain